Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06245 and BSU40700
See
Amino acid alignment /
Visit
BSNT_06245 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:54
# Commandline: needle
# -asequence dna-align/BSNT_06245.1.22522.seq
# -bsequence dna-align/BSU40700___yybB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06245-BSU40700___yybB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06245-BSU40700___yybB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06245
# 2: BSU40700___yybB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 663
# Identity: 385/663 (58.1%)
# Similarity: 385/663 (58.1%)
# Gaps: 270/663 (40.7%)
# Score: 1883.0
#
#
#=======================================
BSNT_06245 1 GTGAACTTGAGACAACTATCAGAACATGTCTATCAATGTGAATTTGAGCT 50
|||||.|||||||||||||||||||||||||.||||||||||||||||||
BSU40700___yy 1 GTGAATTTGAGACAACTATCAGAACATGTCTTTCAATGTGAATTTGAGCT 50
BSNT_06245 51 TGATGTGCCTCTTCGGATTCCGGTTCATACCTGGTTTATCAAAGATGGTG 100
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU40700___yy 51 TGATGTGCCTCTTCGTATTCCGGTTCATACCTGGTTTATCAAAGATGGTG 100
BSNT_06245 101 ATGATGTTTATATTGTTGATACGGGTATAGAACGTTTTGCTGATGCTCAA 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU40700___yy 101 ATGATGTTTATATTGTTGATACGGGAATAGAACGTTTTGCTGATGCTCAA 150
BSNT_06245 151 ATTAGGGCAGCGTTAGTGATCGGCAATCCAAAAGCCATTTTGCTTACCCA 200
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU40700___yy 151 ATTAGGGCAGCGTTAGCGATCGGCAATCCAAAAGCCATTTTGCTTACCCA 200
BSNT_06245 201 TGGCCACAGTGATCATATCGGAGGTGCATCAAAATGGTTAGAGAGATTTG 250
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU40700___yy 201 TGGCCACAGTGATCATATCGGGGGTGCATCAAAATGGTTAGAGAGATTTG 250
BSNT_06245 251 ATATTCCGATTTTTGCGCACCAGAAAGAACTAAAGTACATCAATGGGGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40700___yy 251 ATATTCCGATTTTTGCGCACCAGAAAGAACTAAAGTACATCAATGGGGAA 300
BSNT_06245 301 GAGCCATATCCGAACAAAAATGAAGTGGAGAACACAGGGGTAGCCCATAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40700___yy 301 GAGCCATATCCGAACAAAAATGAAGTGGAGAACACAGGGGTAGCCCATAT 350
BSNT_06245 351 TGTCCAGCCGCTGACGGAGC-AACGCTTGCTCACCTGCCTCTGA------ 393
|||.|||||||||||||||| ||||||||||||.||||||||||
BSU40700___yy 351 TGTACAGCCGCTGACGGAGCAAACGCTTGCTCATCTGCCTCTGAAATACT 400
BSNT_06245 393 -------------------------------------------------- 393
BSU40700___yy 401 ATTTAACACCTGGCCATTCGCCGGGGCATGTTGTGTATTATCATAAAATC 450
BSNT_06245 393 -------------------------------------------------- 393
BSU40700___yy 451 GATCGTACGCTATTGACGGGCGACCTTTTTATCACAAGTAAGGAGGATTT 500
BSNT_06245 393 -------------------------------------------------- 393
BSU40700___yy 501 ACACCCACCTATAAGAAGATTCAGTGTTGATATAAATGAGAACATCGACA 550
BSNT_06245 393 -------------------------------------------------- 393
BSU40700___yy 551 GCGGCTCAATCATAGATCAAATCAAACCAACGCTCATTTGCTCTTCACAT 600
BSNT_06245 393 -------------------------------------------------- 393
BSU40700___yy 601 GGCGAAGAAATCCTTTATAACGAAGAATTGTATAAAAACTATGTGGTAAG 650
BSNT_06245 393 ------------- 393
BSU40700___yy 651 GTATAGGGATTAA 663
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.