Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06224 and BSU40520

See Amino acid alignment / Visit BSNT_06224 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence dna-align/BSNT_06224___yybS.1.22522.seq
#    -bsequence dna-align/BSU40520___yybS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06224___yybS-BSU40520___yybS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06224___yybS-BSU40520___yybS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06224___yybS
# 2: BSU40520___yybS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity:     927/930 (99.7%)
# Similarity:   927/930 (99.7%)
# Gaps:           0/930 ( 0.0%)
# Score: 4623.0
# 
#
#=======================================

BSNT_06224___      1 GTGAAACAAACGAGAGCTTTAATGGAAGGTGCTATTTTAATCAGTCTGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy      1 GTGAAACAAACGAGAGCTTTAATGGAAGGTGCTATTTTAATCAGTCTGTT     50

BSNT_06224___     51 TGCGATCATTACGCTTCTGGTCGTTTATGTTCCTGTGATTGGAACAATTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy     51 TGCGATCATTACGCTTCTGGTCGTTTATGTTCCTGTGATTGGAACAATTC    100

BSNT_06224___    101 TGTTATTTGCACTGCCGCTGCCAATGATCTTGTATACGATCAGACATGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    101 TGTTATTTGCACTGCCGCTGCCAATGATCTTGTATACGATCAGACATGGA    150

BSNT_06224___    151 TTGAAGCTAGGGATATGGATGGGCGCTGTCAGTCTTCCGGTTGTTTTTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    151 TTGAAGCTAGGGATATGGATGGGCGCTGTCAGTCTTCCGGTTGTTTTTAT    200

BSNT_06224___    201 TGTCGGGTCCTTTAACGGGCTTATTGTAGCTTTTATGTCAGCTTGCGCCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    201 TGTCGGGTCCTTTAACGGGCTTATTGTAGCTTTTATGTCAGCTTGCGCCG    250

BSNT_06224___    251 GCATTGCCATGGGACATTTTTTCAAAAGGAAAGAGCCCGGGCACGCCATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    251 GCATTGCCATGGGACATTTTTTCAAAAGGAAAGAGCCCGGGCACGCCATT    300

BSNT_06224___    301 ATTTCGGGCGCTCTTATTTATATGCTTAGTATTGTCTTCTATTTTGTGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    301 ATTTCGGGCGCTCTTATTTATATGCTTAGTATTGTCTTCTATTTTGTGAT    350

BSNT_06224___    351 AAGCATTCAGTTTTTGGGTATCAATATCATTGATGAGGCGATGACACAAT    400
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU40520___yy    351 AAGCATTCAGTTTTTGGGTATCAATATCATTGATGAGGCAATGACACAAT    400

BSNT_06224___    401 ACCGGCAATCTCTTGATATGGTAGAAACTGTAGCGAAGCAGTCGGGCAAT    450
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU40520___yy    401 ACCGGCAATCTCTTGATATTGTAGAAACTGTAGCGAAGCAGTCGGGCAAT    450

BSNT_06224___    451 GCTGGACAGTTTGAGAAGCAATTAAAACTGATGGAAGAACAATTGGGTAT    500
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    451 GCTGGGCAGTTTGAGAAGCAATTAAAACTGATGGAAGAACAATTGGGTAT    500

BSNT_06224___    501 CGTTCAATATCTTTTTCCAACAGCTATTGTGATGGTAGGAGTTATTTTTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    501 CGTTCAATATCTTTTTCCAACAGCTATTGTGATGGTAGGAGTTATTTTTT    550

BSNT_06224___    551 CTTTCCTCAGTTACCTTATCGCTAAGCCGCTCTTAAGGCGATTCTCCCCC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    551 CTTTCCTCAGTTACCTTATCGCTAAGCCGCTCTTAAGGCGATTCTCCCCC    600

BSNT_06224___    601 GATATTCCTAATCTAAAGCCTTTTAGAGAGTTGAAGTTTCCGCAAAGTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    601 GATATTCCTAATCTAAAGCCTTTTAGAGAGTTGAAGTTTCCGCAAAGTGT    650

BSNT_06224___    651 TGTAGTACTGTATTTGATTATTGTCATGCTTTCATTTTTGCCTTTAGAAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    651 TGTAGTACTGTATTTGATTATTGTCATGCTTTCATTTTTGCCTTTAGAAA    700

BSNT_06224___    701 AAGGCCAAATGCTGTACTCTATCGCTTTAAATGGGGAGTTTATACTCGGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    701 AAGGCCAAATGCTGTACTCTATCGCTTTAAATGGGGAGTTTATACTCGGG    750

BSNT_06224___    751 TTTCTGATTTTCATCCAAGGTTTATCATTTATCTTTTTCTATTGCCATAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    751 TTTCTGATTTTCATCCAAGGTTTATCATTTATCTTTTTCTATTGCCATAA    800

BSNT_06224___    801 GAAACAATATCCAAAGGCTGCGGCTGTGATTGCTGTCATACTTGGGTTTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    801 GAAACAATATCCAAAGGCTGCGGCTGTGATTGCTGTCATACTTGGGTTTG    850

BSNT_06224___    851 TGCATCCGGTCTTCATGGCGGCCATTCGCATTTTAGGCGTTTTAGATATG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40520___yy    851 TGCATCCGGTCTTCATGGCGGCCATTCGCATTTTAGGCGTTTTAGATATG    900

BSNT_06224___    901 GGCTTTCATATAAGGAATAAGGTGAAGTGA    930
                     ||||||||||||||||||||||||||||||
BSU40520___yy    901 GGCTTTCATATAAGGAATAAGGTGAAGTGA    930


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