Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_06221 and BSU40490

See Amino acid alignment / Visit BSNT_06221 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:52
# Commandline: needle
#    -asequence dna-align/BSNT_06221___yycA.1.22522.seq
#    -bsequence dna-align/BSU40490___yycA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06221___yycA-BSU40490___yycA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06221___yycA-BSU40490___yycA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06221___yycA
# 2: BSU40490___yycA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2058
# Identity:    2014/2058 (97.9%)
# Similarity:  2014/2058 (97.9%)
# Gaps:           0/2058 ( 0.0%)
# Score: 9894.0
# 
#
#=======================================

BSNT_06221___      1 ATGAAAACCAAACGATTCGACGCAGCCCTTATTCTTATTTTGCTGGCAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU40490___yy      1 ATGAAAACCAAACGATTCGACGCAGCCCTTATTCTTATTTTGCTAGCAGC     50

BSNT_06221___     51 AGCTTTTTTGAATACGTATCACATTTGGCAGGATGATACAGCGAACCAGT    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU40490___yy     51 AGCTTTTTTGAATACGTATCACATTTGGCAGGATGATACAGCAAACCAGT    100

BSNT_06221___    101 ACTATTTGGCGGCTGTAAAAAGCATGACGCAAAGCTTCCATAATTTCTTT    150
                     |||||||||||||||||||||||||||||||||||||||||||.||.|||
BSU40490___yy    101 ACTATTTGGCGGCTGTAAAAAGCATGACGCAAAGCTTCCATAACTTTTTT    150

BSNT_06221___    151 TATGCGTCATTTGACCCTTCTGGATTTGTGACAGTAGATAAGCCTCCTGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy    151 TATGCGTCATTTGACCCTTCTGGATTTGTGACAGTAGATAAGCCTCCTGT    200

BSNT_06221___    201 CGTGTTATGGATTCAAACGATTTTCGCACTGATTTTCGGTGTTCACACGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy    201 CGTGTTATGGATTCAAACGATTTTCGCACTGATTTTCGGTGTTCACACGT    250

BSNT_06221___    251 GGAGTGTCATCATTCCCCAGGCTCTTGCCGGAGTTGGATCTGTCTTCCTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy    251 GGAGTGTCATCATTCCCCAGGCTCTTGCCGGAGTTGGATCTGTCTTCCTT    300

BSNT_06221___    301 CTCTACAGAGTGATCAAGCCGACTTTTGGAATTGGAGCGGCCCGCATTTC    350
                     |||||||||.||.|.|||||||||||||||.|||||||||||||||||.|
BSU40490___yy    301 CTCTACAGAATGGTTAAGCCGACTTTTGGAGTTGGAGCGGCCCGCATTGC    350

BSNT_06221___    351 CGCACTTGTTATGGCACTGACCCCTATCGCAGTAGCTGTCAGCCGGACAA    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU40490___yy    351 CGCACTTGTCATGGCACTGACCCCTATCGCAGTAGCTGTCAGCCGGACAA    400

BSNT_06221___    401 ACAATATTGACAGCATGCTTGTCTTTACCATATTGCTCGGTTCAGCTTGC    450
                     |||||||.||||||||||||||.||||||.||||||||||||||.||||.
BSU40490___yy    401 ACAATATCGACAGCATGCTTGTTTTTACCTTATTGCTCGGTTCAACTTGT    450

BSNT_06221___    451 CTGTTTCGGGCAGTAAAACAAGGCAAGCTGGTTTGGCTGCTGACGGCATT    500
                     |||.||.|||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy    451 CTGCTTAGGGCAGTAAAACAAGGCAAGCTGGTTTGGCTGCTGACGGCATT    500

BSNT_06221___    501 TGCCCTAATTGGGCTCGCCTTTAATATGAAGATGATGCAAGCGTTTATGG    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy    501 TGCCCTGATTGGGCTCGCCTTTAATATGAAGATGATGCAAGCGTTTATGG    550

BSNT_06221___    551 TATTGCCTGCATTTGTGTTATTCTACCTGGTTGCATATCGGGTTTCTCTG    600
                     |||||||||||||||||||||||||||||.||||||.|||||||||||||
BSU40490___yy    551 TATTGCCTGCATTTGTGTTATTCTACCTGATTGCATCTCGGGTTTCTCTG    600

BSNT_06221___    601 AAGAAAAAAATCGGGTCCCTGCTTCTGTCTCTTGTCCTTCTGACAGGCCT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy    601 AAGAAAAAAATCGGGTCCCTGCTTCTGTCTCTTGTCCTTCTGACAGGCCT    650

BSNT_06221___    651 TTCCCTCTCATGGGCGATTGCAGTGGATTCAGCCTCTTCCTCAAGCCGGC    700
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy    651 TTCACTCTCATGGGCGATTGCAGTGGATTCAGCCTCTTCCTCAAGCCGGC    700

BSNT_06221___    701 CTTATGTAGGAAGCAGCCAGACCAACTCAGTGCTAGAACTGGCCTTTGGC    750
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU40490___yy    701 CTTATGTAGGAAGCAGCCAGACTAACTCAGTGCTAGAACTGGCCTTTGGC    750

BSNT_06221___    751 TACAACGGCACAGAGCGTCTGCTTGGGCAAACTACGGGCCTGGCAAAGGG    800
                     |||||||||||||||||||||.|||||||||||||||||||.||||||||
BSU40490___yy    751 TACAACGGCACAGAGCGTCTGTTTGGGCAAACTACGGGCCTTGCAAAGGG    800

BSNT_06221___    801 TGATATGAATGCTGCTGGCGGAGGGAAGATGCAGAATCAAGACAACATGC    850
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU40490___yy    801 TGATATGAATGCTGCTGGCGGAGGGAACATGCAGAATCAAGACAACATGC    850

BSNT_06221___    851 AAGCGCCAAATGGCAACGGTTCATCTTTTTCTCAGAACGGAAATCAATCA    900
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU40490___yy    851 AAGCGCCAAATGGCAACGGTTCATCTTTTTCTCAGAACGGTAATCAATCA    900

BSNT_06221___    901 TTCGGAAACCATTCACATGCGCCTCAGCCGTCTAACGGACAAACCGGCGC    950
                     |||||||||||||||||.||||||||||||.|||||||||||||||||||
BSU40490___yy    901 TTCGGAAACCATTCACAGGCGCCTCAGCCGCCTAACGGACAAACCGGCGC    950

BSNT_06221___    951 TCTCAATGGAGGCGGAGGCACACCTCCCACAGGTGGCAACGGTCCTGGAA   1000
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU40490___yy    951 TCTCAATGGAGGCGGAGGCACACCTCCCACAGGTGGCAACGGACCTGGAA   1000

BSNT_06221___   1001 ATGGAGGGCCTGGCGGTGGAGGCGGAAAAAGCGTGAATATGTTCGGCACC   1050
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU40490___yy   1001 ATGGAGGGCCTGGCGGCGGAGGCGGAAAAAGCGTGAATATGTTCGGCACC   1050

BSNT_06221___   1051 GGTGATCCTGGACCGCTTCGTCTTTTCCAATCAGCACTCTCCGGCCAAAT   1100
                     |||||||||||||||||||||||.||||||||||||||.|||||||||||
BSU40490___yy   1051 GGTGATCCTGGACCGCTTCGTCTCTTCCAATCAGCACTTTCCGGCCAAAT   1100

BSNT_06221___   1101 CAGCTGGATGCTTCCATTCTCATTGATCGGATTACTGGGCGCAATCGTCA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU40490___yy   1101 CAGCTGGATGCTTCCATTCTCATTGATCGGATTACTGGGCGCAATCATCA   1150

BSNT_06221___   1151 GCTGGTACCGTGATCGCCGCGGACATGCTGCTGAAATGAAAGAAACGCTA   1200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU40490___yy   1151 GCTGGTACCGTGATCGCCGCGGACATGCTGCTAAAATGAAAGAAACGCTA   1200

BSNT_06221___   1201 TTCTGGGCGGCTTGGCTTGTTCCCGTGGCTGGTTTCTTCAGCATCGCAGG   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1201 TTCTGGGCGGCTTGGCTTGTTCCCGTGGCTGGTTTCTTCAGCATCGCAGG   1250

BSNT_06221___   1251 ATTCTTCCACCAGTATTATTTGATTATGCTGGCACCGCCGATTGCCGCCC   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1251 ATTCTTCCACCAGTATTATTTGATTATGCTGGCACCGCCGATTGCCGCCC   1300

BSNT_06221___   1301 TTTCTGGTATCGGATGGTATACGATGCACCGCTTATACAAAAATAATAAA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1301 TTTCTGGTATCGGATGGTATACGATGCACCGCTTATACAAAAATAATAAA   1350

BSNT_06221___   1351 GACTGGTCCAGCTATCTTCTGCCGGCAGCCGTTCTGATCACAGCCGCGTT   1400
                     ||||||||||||||||||||||||||||||||..||||||||||||.|||
BSU40490___yy   1351 GACTGGTCCAGCTATCTTCTGCCGGCAGCCGTCTTGATCACAGCCGTGTT   1400

BSNT_06221___   1401 CCAGGTGTATATTCTGAGTGCTTATACAAGCCAAATCGGCAGTGTATGGA   1450
                     .|||||||||||||||||.|||||||||||||||||||||||||||||||
BSU40490___yy   1401 TCAGGTGTATATTCTGAGCGCTTATACAAGCCAAATCGGCAGTGTATGGA   1450

BSNT_06221___   1451 TGTATGTCCTGGGGCTCTTAGGACTGGGCATCACCCTTGCACTTCTGATG   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1451 TGTATGTCCTGGGGCTCTTAGGACTGGGCATCACCCTTGCACTTCTGATG   1500

BSNT_06221___   1501 CTTAAACGCAGCCATCCGTTCAGTAAGCAGCTGACCATCATCAGCTTGTG   1550
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU40490___yy   1501 CTTAAACGCAGCCATCCGTTCAGTAAGCTGCTGACCATCATCAGCTTGTG   1550

BSNT_06221___   1551 CGTTCTGCTTCTCACACCAGTTTACTGGTCAGCAACGCCGCTTCTATACG   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1551 CGTTCTGCTTCTCACACCAGTTTACTGGTCAGCAACGCCGCTTCTATACG   1600

BSNT_06221___   1601 GTGGCAACAGCGTCCTTCCTGAATCCGGCCCGCAGCTCAAAGGCTCAGCA   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1601 GTGGCAACAGCGTCCTTCCTGAATCCGGCCCGCAGCTCAAAGGCTCAGCA   1650

BSNT_06221___   1651 AACGGCGGGAACATGTTCTCTTCAGAGGTCGACAGCGGGCTCCTGTCCTA   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1651 AACGGCGGGAACATGTTCTCTTCAGAGGTCGACAGCGGGCTCCTGTCCTA   1700

BSNT_06221___   1701 TCTGAGAAAACACAATACCGGCGAAGAATATTTATTTGCTACTTTGACAA   1750
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU40490___yy   1701 TCTGAGAAAACACAATACCGGCGAAGAGTATTTATTTGCTACTTTGACAA   1750

BSNT_06221___   1751 CCGTAACAGCTGCGCCATACATCATTTACGAAAATGAATCTGTTATGGCA   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1751 CCGTAACAGCTGCGCCATACATCATTTACGAAAATGAATCTGTTATGGCA   1800

BSNT_06221___   1801 ATGGGCGGATTTAACGGCACGGATCCCATTCTGACTGTGTCGGAACTGAA   1850
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1801 ATGGGCGGGTTTAACGGCACGGATCCCATTCTGACTGTGTCGGAACTGAA   1850

BSNT_06221___   1851 AAAACTGATCAAAGAAGGCAAAGTGAAATACTTCCTTCTGTCAGAAAACA   1900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1851 AAAACTGATCAAAGAAGGCAAAGTGAAATACTTCCTTCTGTCAGAAAACA   1900

BSNT_06221___   1901 ACTCAGGCAACAGCGAACTTGTTTCCTGGATTAAGAAAAACGGAAAAGAA   1950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy   1901 ACTCAGGCAACAGCGAACTTGTTTCCTGGATTAAGAAAAACGGAAAAGAA   1950

BSNT_06221___   1951 ATAACATCTGACGAGTACAGCGGTTCCTCCAGCAGCACGAACAGCGTGCA   2000
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU40490___yy   1951 ATAACATCTGACGAGTACAGCGGTTCCTCCAGCAGCACAAACAGCGTGCA   2000

BSNT_06221___   2001 GGGAATGCGAGGAGGACCTGGCGGAGAAAGCCAGCAAACTCTTTATCTCG   2050
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU40490___yy   2001 GGGAATGCGAAGAGGACCTGGCGGAGAAAGCCAGCAAACTCTTTATCTCG   2050

BSNT_06221___   2051 TGGAATAA   2058
                     ||||||||
BSU40490___yy   2051 TGGAATAA   2058


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.