Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06221 and BSU40490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:52
# Commandline: needle
# -asequence dna-align/BSNT_06221___yycA.1.22522.seq
# -bsequence dna-align/BSU40490___yycA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06221___yycA-BSU40490___yycA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06221___yycA-BSU40490___yycA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06221___yycA
# 2: BSU40490___yycA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2058
# Identity: 2014/2058 (97.9%)
# Similarity: 2014/2058 (97.9%)
# Gaps: 0/2058 ( 0.0%)
# Score: 9894.0
#
#
#=======================================
BSNT_06221___ 1 ATGAAAACCAAACGATTCGACGCAGCCCTTATTCTTATTTTGCTGGCAGC 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU40490___yy 1 ATGAAAACCAAACGATTCGACGCAGCCCTTATTCTTATTTTGCTAGCAGC 50
BSNT_06221___ 51 AGCTTTTTTGAATACGTATCACATTTGGCAGGATGATACAGCGAACCAGT 100
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU40490___yy 51 AGCTTTTTTGAATACGTATCACATTTGGCAGGATGATACAGCAAACCAGT 100
BSNT_06221___ 101 ACTATTTGGCGGCTGTAAAAAGCATGACGCAAAGCTTCCATAATTTCTTT 150
|||||||||||||||||||||||||||||||||||||||||||.||.|||
BSU40490___yy 101 ACTATTTGGCGGCTGTAAAAAGCATGACGCAAAGCTTCCATAACTTTTTT 150
BSNT_06221___ 151 TATGCGTCATTTGACCCTTCTGGATTTGTGACAGTAGATAAGCCTCCTGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 151 TATGCGTCATTTGACCCTTCTGGATTTGTGACAGTAGATAAGCCTCCTGT 200
BSNT_06221___ 201 CGTGTTATGGATTCAAACGATTTTCGCACTGATTTTCGGTGTTCACACGT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 201 CGTGTTATGGATTCAAACGATTTTCGCACTGATTTTCGGTGTTCACACGT 250
BSNT_06221___ 251 GGAGTGTCATCATTCCCCAGGCTCTTGCCGGAGTTGGATCTGTCTTCCTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 251 GGAGTGTCATCATTCCCCAGGCTCTTGCCGGAGTTGGATCTGTCTTCCTT 300
BSNT_06221___ 301 CTCTACAGAGTGATCAAGCCGACTTTTGGAATTGGAGCGGCCCGCATTTC 350
|||||||||.||.|.|||||||||||||||.|||||||||||||||||.|
BSU40490___yy 301 CTCTACAGAATGGTTAAGCCGACTTTTGGAGTTGGAGCGGCCCGCATTGC 350
BSNT_06221___ 351 CGCACTTGTTATGGCACTGACCCCTATCGCAGTAGCTGTCAGCCGGACAA 400
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 351 CGCACTTGTCATGGCACTGACCCCTATCGCAGTAGCTGTCAGCCGGACAA 400
BSNT_06221___ 401 ACAATATTGACAGCATGCTTGTCTTTACCATATTGCTCGGTTCAGCTTGC 450
|||||||.||||||||||||||.||||||.||||||||||||||.||||.
BSU40490___yy 401 ACAATATCGACAGCATGCTTGTTTTTACCTTATTGCTCGGTTCAACTTGT 450
BSNT_06221___ 451 CTGTTTCGGGCAGTAAAACAAGGCAAGCTGGTTTGGCTGCTGACGGCATT 500
|||.||.|||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 451 CTGCTTAGGGCAGTAAAACAAGGCAAGCTGGTTTGGCTGCTGACGGCATT 500
BSNT_06221___ 501 TGCCCTAATTGGGCTCGCCTTTAATATGAAGATGATGCAAGCGTTTATGG 550
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 501 TGCCCTGATTGGGCTCGCCTTTAATATGAAGATGATGCAAGCGTTTATGG 550
BSNT_06221___ 551 TATTGCCTGCATTTGTGTTATTCTACCTGGTTGCATATCGGGTTTCTCTG 600
|||||||||||||||||||||||||||||.||||||.|||||||||||||
BSU40490___yy 551 TATTGCCTGCATTTGTGTTATTCTACCTGATTGCATCTCGGGTTTCTCTG 600
BSNT_06221___ 601 AAGAAAAAAATCGGGTCCCTGCTTCTGTCTCTTGTCCTTCTGACAGGCCT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 601 AAGAAAAAAATCGGGTCCCTGCTTCTGTCTCTTGTCCTTCTGACAGGCCT 650
BSNT_06221___ 651 TTCCCTCTCATGGGCGATTGCAGTGGATTCAGCCTCTTCCTCAAGCCGGC 700
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 651 TTCACTCTCATGGGCGATTGCAGTGGATTCAGCCTCTTCCTCAAGCCGGC 700
BSNT_06221___ 701 CTTATGTAGGAAGCAGCCAGACCAACTCAGTGCTAGAACTGGCCTTTGGC 750
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU40490___yy 701 CTTATGTAGGAAGCAGCCAGACTAACTCAGTGCTAGAACTGGCCTTTGGC 750
BSNT_06221___ 751 TACAACGGCACAGAGCGTCTGCTTGGGCAAACTACGGGCCTGGCAAAGGG 800
|||||||||||||||||||||.|||||||||||||||||||.||||||||
BSU40490___yy 751 TACAACGGCACAGAGCGTCTGTTTGGGCAAACTACGGGCCTTGCAAAGGG 800
BSNT_06221___ 801 TGATATGAATGCTGCTGGCGGAGGGAAGATGCAGAATCAAGACAACATGC 850
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU40490___yy 801 TGATATGAATGCTGCTGGCGGAGGGAACATGCAGAATCAAGACAACATGC 850
BSNT_06221___ 851 AAGCGCCAAATGGCAACGGTTCATCTTTTTCTCAGAACGGAAATCAATCA 900
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU40490___yy 851 AAGCGCCAAATGGCAACGGTTCATCTTTTTCTCAGAACGGTAATCAATCA 900
BSNT_06221___ 901 TTCGGAAACCATTCACATGCGCCTCAGCCGTCTAACGGACAAACCGGCGC 950
|||||||||||||||||.||||||||||||.|||||||||||||||||||
BSU40490___yy 901 TTCGGAAACCATTCACAGGCGCCTCAGCCGCCTAACGGACAAACCGGCGC 950
BSNT_06221___ 951 TCTCAATGGAGGCGGAGGCACACCTCCCACAGGTGGCAACGGTCCTGGAA 1000
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU40490___yy 951 TCTCAATGGAGGCGGAGGCACACCTCCCACAGGTGGCAACGGACCTGGAA 1000
BSNT_06221___ 1001 ATGGAGGGCCTGGCGGTGGAGGCGGAAAAAGCGTGAATATGTTCGGCACC 1050
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU40490___yy 1001 ATGGAGGGCCTGGCGGCGGAGGCGGAAAAAGCGTGAATATGTTCGGCACC 1050
BSNT_06221___ 1051 GGTGATCCTGGACCGCTTCGTCTTTTCCAATCAGCACTCTCCGGCCAAAT 1100
|||||||||||||||||||||||.||||||||||||||.|||||||||||
BSU40490___yy 1051 GGTGATCCTGGACCGCTTCGTCTCTTCCAATCAGCACTTTCCGGCCAAAT 1100
BSNT_06221___ 1101 CAGCTGGATGCTTCCATTCTCATTGATCGGATTACTGGGCGCAATCGTCA 1150
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU40490___yy 1101 CAGCTGGATGCTTCCATTCTCATTGATCGGATTACTGGGCGCAATCATCA 1150
BSNT_06221___ 1151 GCTGGTACCGTGATCGCCGCGGACATGCTGCTGAAATGAAAGAAACGCTA 1200
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU40490___yy 1151 GCTGGTACCGTGATCGCCGCGGACATGCTGCTAAAATGAAAGAAACGCTA 1200
BSNT_06221___ 1201 TTCTGGGCGGCTTGGCTTGTTCCCGTGGCTGGTTTCTTCAGCATCGCAGG 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1201 TTCTGGGCGGCTTGGCTTGTTCCCGTGGCTGGTTTCTTCAGCATCGCAGG 1250
BSNT_06221___ 1251 ATTCTTCCACCAGTATTATTTGATTATGCTGGCACCGCCGATTGCCGCCC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1251 ATTCTTCCACCAGTATTATTTGATTATGCTGGCACCGCCGATTGCCGCCC 1300
BSNT_06221___ 1301 TTTCTGGTATCGGATGGTATACGATGCACCGCTTATACAAAAATAATAAA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1301 TTTCTGGTATCGGATGGTATACGATGCACCGCTTATACAAAAATAATAAA 1350
BSNT_06221___ 1351 GACTGGTCCAGCTATCTTCTGCCGGCAGCCGTTCTGATCACAGCCGCGTT 1400
||||||||||||||||||||||||||||||||..||||||||||||.|||
BSU40490___yy 1351 GACTGGTCCAGCTATCTTCTGCCGGCAGCCGTCTTGATCACAGCCGTGTT 1400
BSNT_06221___ 1401 CCAGGTGTATATTCTGAGTGCTTATACAAGCCAAATCGGCAGTGTATGGA 1450
.|||||||||||||||||.|||||||||||||||||||||||||||||||
BSU40490___yy 1401 TCAGGTGTATATTCTGAGCGCTTATACAAGCCAAATCGGCAGTGTATGGA 1450
BSNT_06221___ 1451 TGTATGTCCTGGGGCTCTTAGGACTGGGCATCACCCTTGCACTTCTGATG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1451 TGTATGTCCTGGGGCTCTTAGGACTGGGCATCACCCTTGCACTTCTGATG 1500
BSNT_06221___ 1501 CTTAAACGCAGCCATCCGTTCAGTAAGCAGCTGACCATCATCAGCTTGTG 1550
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU40490___yy 1501 CTTAAACGCAGCCATCCGTTCAGTAAGCTGCTGACCATCATCAGCTTGTG 1550
BSNT_06221___ 1551 CGTTCTGCTTCTCACACCAGTTTACTGGTCAGCAACGCCGCTTCTATACG 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1551 CGTTCTGCTTCTCACACCAGTTTACTGGTCAGCAACGCCGCTTCTATACG 1600
BSNT_06221___ 1601 GTGGCAACAGCGTCCTTCCTGAATCCGGCCCGCAGCTCAAAGGCTCAGCA 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1601 GTGGCAACAGCGTCCTTCCTGAATCCGGCCCGCAGCTCAAAGGCTCAGCA 1650
BSNT_06221___ 1651 AACGGCGGGAACATGTTCTCTTCAGAGGTCGACAGCGGGCTCCTGTCCTA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1651 AACGGCGGGAACATGTTCTCTTCAGAGGTCGACAGCGGGCTCCTGTCCTA 1700
BSNT_06221___ 1701 TCTGAGAAAACACAATACCGGCGAAGAATATTTATTTGCTACTTTGACAA 1750
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU40490___yy 1701 TCTGAGAAAACACAATACCGGCGAAGAGTATTTATTTGCTACTTTGACAA 1750
BSNT_06221___ 1751 CCGTAACAGCTGCGCCATACATCATTTACGAAAATGAATCTGTTATGGCA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1751 CCGTAACAGCTGCGCCATACATCATTTACGAAAATGAATCTGTTATGGCA 1800
BSNT_06221___ 1801 ATGGGCGGATTTAACGGCACGGATCCCATTCTGACTGTGTCGGAACTGAA 1850
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1801 ATGGGCGGGTTTAACGGCACGGATCCCATTCTGACTGTGTCGGAACTGAA 1850
BSNT_06221___ 1851 AAAACTGATCAAAGAAGGCAAAGTGAAATACTTCCTTCTGTCAGAAAACA 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1851 AAAACTGATCAAAGAAGGCAAAGTGAAATACTTCCTTCTGTCAGAAAACA 1900
BSNT_06221___ 1901 ACTCAGGCAACAGCGAACTTGTTTCCTGGATTAAGAAAAACGGAAAAGAA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40490___yy 1901 ACTCAGGCAACAGCGAACTTGTTTCCTGGATTAAGAAAAACGGAAAAGAA 1950
BSNT_06221___ 1951 ATAACATCTGACGAGTACAGCGGTTCCTCCAGCAGCACGAACAGCGTGCA 2000
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU40490___yy 1951 ATAACATCTGACGAGTACAGCGGTTCCTCCAGCAGCACAAACAGCGTGCA 2000
BSNT_06221___ 2001 GGGAATGCGAGGAGGACCTGGCGGAGAAAGCCAGCAAACTCTTTATCTCG 2050
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU40490___yy 2001 GGGAATGCGAAGAGGACCTGGCGGAGAAAGCCAGCAAACTCTTTATCTCG 2050
BSNT_06221___ 2051 TGGAATAA 2058
||||||||
BSU40490___yy 2051 TGGAATAA 2058
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