Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06219 and BSU40480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:51
# Commandline: needle
# -asequence dna-align/BSNT_06219___yycB.1.22522.seq
# -bsequence dna-align/BSU40480___yycB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06219___yycB-BSU40480___yycB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06219___yycB-BSU40480___yycB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06219___yycB
# 2: BSU40480___yycB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1209
# Identity: 1189/1209 (98.3%)
# Similarity: 1189/1209 (98.3%)
# Gaps: 0/1209 ( 0.0%)
# Score: 5865.0
#
#
#=======================================
BSNT_06219___ 1 TTGCCACATCCACATAATAAAAAAATCCAATCATTTTGGCTGATCACCGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 1 TTGCCACATCCACATAATAAAAAAATCCAATCATTTTGGCTGATCACCGG 50
BSNT_06219___ 51 CATTATCTTTATCGCCTTTAACTTACGGCCCGCGATCACTTCAGTCGGTC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 51 CATTATCTTTATCGCCTTTAACTTACGGCCCGCGATCACTTCAGTCGGTC 100
BSNT_06219___ 101 CGGTCATCAGCTCTATCCGGGCAGAACTGCACATGTCCAATGGGGCAGCC 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU40480___yy 101 CGGTCATCAGCTCTATCCGGGCAGAGCTGCACATGTCCAATGGGGCAGCC 150
BSNT_06219___ 151 GGTTTTTTGACCGCACTGCCGCTGCTTTCGTTTGCAGTTCTTTCTCCGCT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 151 GGTTTTTTGACCGCACTGCCGCTGCTTTCGTTTGCAGTTCTTTCTCCGCT 200
BSNT_06219___ 201 TGCACCTAAGCTTGGACAGCGCCTCGGAAATGAGCGAACTTTATGGCTAG 250
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU40480___yy 201 TGCACCTAAGCTTGGACAGCGCCTCGGTAATGAGCGAACTTTATGGCTAG 250
BSNT_06219___ 251 GTCTCGTGATACTGCTTATCGGCGTTTTGACTCGTTCTACCGGCTATACT 300
||||||||||||||||.|||||.|||.|||||||||||||||||||||||
BSU40480___yy 251 GTCTCGTGATACTGCTGATCGGTGTTCTGACTCGTTCTACCGGCTATACT 300
BSNT_06219___ 301 GCCGCTTTGTTTTTCGGAACGGCACTTATCGGCGTCGGGATTGCGATTGG 350
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU40480___yy 301 GCCGCTTTGTTTTTCGGAACAGCACTTATCGGCGTCGGGATTGCGATTGG 350
BSNT_06219___ 351 TAACGTACTTTTGCCAAGCTTAATCAAACATAAATACCCTGAAAAGCCAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 351 TAACGTACTTTTGCCAAGCTTAATCAAACATAAATACCCTGAAAAGCCAG 400
BSNT_06219___ 401 GGATCGTGATCAGCCTGTATACGACATCAATGAATATATTCGCAGCTTTA 450
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 401 GGATCATGATCAGCCTGTATACGACATCAATGAATATATTCGCAGCTTTA 450
BSNT_06219___ 451 GCATCGGGTGTCAGCGTTCCTTTAGCGACCCAGATGGATGGCGGATGGAA 500
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU40480___yy 451 GCATCGGGTGTCAGCGTTCCTTTAGCGACCCAGATGAATGGCGGATGGAA 500
BSNT_06219___ 501 ACAGGCCTTTCTCTTATGGGGCGGGCTGGCTTTACTTGCATTGCTAATCT 550
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 501 ACAAGCCTTTCTCTTATGGGGCGGGCTGGCTTTACTTGCATTGCTAATCT 550
BSNT_06219___ 551 GGATACCTCAGCTGCGCCACCGGGATACGGCAAACCAGACAATGAAGCTG 600
|||||||||||||||||||.||.|||||||||||||||||||||||||||
BSU40480___yy 551 GGATACCTCAGCTGCGCCATCGAGATACGGCAAACCAGACAATGAAGCTG 600
BSNT_06219___ 601 CAATCCAGTTCCATTTGGGCTTCCAAAATGGCATGGTATGTCACCATCTT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 601 CAATCCAGTTCCATTTGGGCTTCCAAAATGGCATGGTATGTCACCATCTT 650
BSNT_06219___ 651 TATGGGCCTGCAATCGTTTTTATTTTACAGCAGCATCGCTTGGTTTCCTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 651 TATGGGCCTGCAATCGTTTTTATTTTACAGCAGCATCGCTTGGTTTCCTG 700
BSNT_06219___ 701 AAATTCTCCGTTCACACGGGATTGATACGGCAACAGCCGGATGGATGGTA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 701 AAATTCTCCGTTCACACGGGATTGATACGGCAACAGCCGGATGGATGGTA 750
BSNT_06219___ 751 TCACTCATGCAATTTGCGAGTCTGCCTTCCACTTTTCTGACACCAGTTTT 800
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU40480___yy 751 TCACTCATGCAATTTGCGAGTCTGCCTTCCACTTTTCTGACGCCAGTTTT 800
BSNT_06219___ 801 AGCTGACCGTGTGAAACAGCAGCGCGGTATCGTTGCGGCGCTGGCCTCAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 801 AGCTGACCGTGTGAAACAGCAGCGCGGTATCGTTGCGGCGCTGGCCTCAG 850
BSNT_06219___ 851 TTTATCTGATCGGCCTTTGCGGATTATTAGCGGGCGGAAGCCATACATTG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 851 TTTATCTGATCGGCCTTTGCGGATTATTAGCGGGCGGAAGCCATACATTG 900
BSNT_06219___ 901 CTTGCCATCTGGATGATCATTATCGGTATCGGGCAAGGCTCCAGCATTAG 950
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU40480___yy 901 CTTGCCATCTGGATGATCATTATCGGTATCGGACAAGGCTCCAGCATTAG 950
BSNT_06219___ 951 TCTGGCGCTCACTTTGATTGGTCTCCGCAGTGAAAATGCCCAACAGGCCG 1000
||||||.||.||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 951 TCTGGCCCTTACTTTGATTGGTCTCCGCAGTGAAAATGCCCAACAGGCCG 1000
BSNT_06219___ 1001 CTGCGCTGTCAGGCATGTCTCAGTCATTCGGCTACCTGCTGGCAGCAGTC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40480___yy 1001 CTGCGCTGTCAGGCATGTCTCAGTCATTCGGCTACCTGCTGGCAGCAGTC 1050
BSNT_06219___ 1051 GGGCCAATCTTTGTCGGCTATCTCTTTGACCAGACGCATTCATGGACGAT 1100
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU40480___yy 1051 GGGCCAATCTTTGTCGGCTATCTCTTTGACCAGACGCATTCTTGGACGAT 1100
BSNT_06219___ 1101 GCCGATAGTGCTTCTCATTGCTGCCCTGATCGTAATGGGAGCAGCTGGAC 1150
||||||.||||||||||||||||||||||||||||||||||||||.||||
BSU40480___yy 1101 GCCGATTGTGCTTCTCATTGCTGCCCTGATCGTAATGGGAGCAGCCGGAC 1150
BSNT_06219___ 1151 AGAGAGCCGGACGAGATCGATACATTTTTCAGTCAGAAAAACAAAGAAAT 1200
||.|||||||||||||||||||||||||.|||||||||||||||||||||
BSU40480___yy 1151 AGGGAGCCGGACGAGATCGATACATTTTCCAGTCAGAAAAACAAAGAAAT 1200
BSNT_06219___ 1201 TCAGCATAA 1209
|||||||||
BSU40480___yy 1201 TCAGCATAA 1209
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