Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06200 and BSU40410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence dna-align/BSNT_06200___yycF.1.22522.seq
# -bsequence dna-align/BSU40410___walR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06200___yycF-BSU40410___walR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06200___yycF-BSU40410___walR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06200___yycF
# 2: BSU40410___walR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 711
# Identity: 701/711 (98.6%)
# Similarity: 701/711 (98.6%)
# Gaps: 3/711 ( 0.4%)
# Score: 3477.0
#
#
#=======================================
BSNT_06200___ 1 ATGATGGATAAAAAGATCCTTGTAGTAGATGATGAAAAACCGATTGCAGA 50
|||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 1 ---ATGGATAAAAAGATCCTTGTAGTAGATGATGAAAAACCGATTGCAGA 47
BSNT_06200___ 51 TATATTGGAATTTAACTTAAGAAAAGAAGGCTATGAAGTGCACTGTGCCC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 48 TATATTGGAATTTAACTTAAGAAAAGAAGGCTATGAAGTGCACTGTGCCC 97
BSNT_06200___ 101 ATGACGGAAACGAAGCCGTTGAAATGGTAGAAGAGCTTCAGCCTGATTTA 150
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 98 ACGACGGAAACGAAGCCGTTGAAATGGTAGAAGAGCTTCAGCCTGATTTA 147
BSNT_06200___ 151 ATTCTTTTAGATATTATGCTCCCGAATAAAGACGGCGTTGAGGTATGCCG 200
|||||||||||||||||||||||.|||||||||||||||||.||||||||
BSU40410___wa 148 ATTCTTTTAGATATTATGCTCCCAAATAAAGACGGCGTTGAAGTATGCCG 197
BSNT_06200___ 201 TGAAGTCAGAAAGAAATACGATATGCCAATCATTATGCTGACGGCTAAGG 250
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 198 CGAAGTCAGAAAGAAATACGATATGCCAATCATTATGCTGACGGCTAAGG 247
BSNT_06200___ 251 ATTCAGAAATTGACAAGGTTATCGGGCTCGAAATCGGTGCTGATGACTAT 300
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU40410___wa 248 ATTCAGAAATTGACAAGGTTATCGGGCTTGAAATCGGTGCTGATGACTAT 297
BSNT_06200___ 301 GTCACAAAACCATTCAGCACACGCGAGCTCTTGGCGCGTGTAAAAGCGAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 298 GTCACAAAACCATTCAGCACACGCGAGCTCTTGGCGCGTGTAAAAGCGAA 347
BSNT_06200___ 351 CCTGCGCCGCCAGCTGACAACAGCGCCTGCGGAGGAAGAGCCTTCCTCTA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 348 CCTGCGCCGCCAGCTGACAACAGCGCCTGCGGAGGAAGAGCCTTCCTCTA 397
BSNT_06200___ 401 ACGAGATTCATATCGGCTCTCTCGTCATCTTCCCTGACGCGTACGTTGTA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 398 ACGAGATTCATATCGGCTCTCTCGTCATCTTCCCTGACGCGTACGTTGTA 447
BSNT_06200___ 451 TCAAAACGAGATGAAACAATCGAATTGACTCATCGTGAGTTCGAATTGCT 500
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU40410___wa 448 TCAAAACGAGACGAAACAATCGAATTGACTCATCGTGAGTTCGAATTGCT 497
BSNT_06200___ 501 TCATTATTTAGCAAAACATATCGGACAAGTGATGACCCGTGAACATTTGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 498 TCATTATTTAGCAAAACATATCGGACAAGTGATGACCCGTGAACATTTGC 547
BSNT_06200___ 551 TTCAAACCGTTTGGGGCTATGATTACTTCGGCGATGTCAGAACGGTTGAC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 548 TTCAAACCGTTTGGGGCTATGATTACTTCGGCGATGTCAGAACGGTTGAC 597
BSNT_06200___ 601 GTAACAGTCCGCCGGCTTCGTGAAAAAATCGAGGACAACCCGAGCCATCC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa 598 GTAACAGTCCGCCGGCTTCGTGAAAAAATCGAGGACAACCCGAGCCATCC 647
BSNT_06200___ 651 AAATTGGATCGTCACACGCCGCGGTGTAGGTTATTACTTGAGAAACCCAG 700
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU40410___wa 648 AAATTGGATCGTCACACGCCGTGGTGTAGGTTATTACTTGAGAAACCCAG 697
BSNT_06200___ 701 AACAGGACTAA 711
|||||||||||
BSU40410___wa 698 AACAGGACTAA 708
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