Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06197 and BSU40380

See Amino acid alignment / Visit BSNT_06197 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:49
# Commandline: needle
#    -asequence dna-align/BSNT_06197___yycI.1.22522.seq
#    -bsequence dna-align/BSU40380___yycI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06197___yycI-BSU40380___yycI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06197___yycI-BSU40380___yycI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06197___yycI
# 2: BSU40380___yycI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 843
# Identity:     836/843 (99.2%)
# Similarity:   836/843 (99.2%)
# Gaps:           0/843 ( 0.0%)
# Score: 4152.0
# 
#
#=======================================

BSNT_06197___      1 GTGGAGTGGAATAAGACAAAATCAATCTTCATCGTTGCCTTCCTCATTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy      1 GTGGAGTGGAATAAGACAAAATCAATCTTCATCGTTGCCTTCCTCATTTT     50

BSNT_06197___     51 AGATATTTTCTTAGGCTATCAGTTTTTTCAAAAATGGCAGGCTACCGGCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy     51 AGATATTTTCTTAGGCTATCAGTTTTTTCAAAAATGGCAGGCTACCGGCA    100

BSNT_06197___    101 AAGAATATGAAGTCATTAAAAATGATGTCGAGCATGACATGAAGGCCGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy    101 AAGAATATGAAGTCATTAAAAATGATGTCGAGCATGACATGAAGGCCGAT    150

BSNT_06197___    151 CATATCACGTATGAAGGCTTGAATAAGGAAGCGACAGAAGGCTATCGGAT    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU40380___yy    151 CATATCACGTATGAAGGCTTGAATAAGGAAGCAACAGAAGGCTATCGGAT    200

BSNT_06197___    201 CACGGCAAATCAAAAGTCTTTCTCCAAGGAGGAAATTGAGGCGCTGAAGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy    201 CACGGCAAATCAAAAGTCTTTCTCCAAGGAGGAAATTGAGGCGCTGAAGG    250

BSNT_06197___    251 ATCAAAAGCCTTTGATGGACATGCCTAGTGATGATCATAAAGTAACGAGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy    251 ATCAAAAGCCTTTGATGGACATGCCTAGTGATGATCATAAAGTAACGAGC    300

BSNT_06197___    301 CTGAAAATGAAGTTTGCAAATCCAATCGCCCTATCAAAGAAGGATATCGA    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU40380___yy    301 CTGAAAATGAAGTTTGCAAATCCAATCGCACTATCAAAGAAGGATATCGA    350

BSNT_06197___    351 GGACGATGCTCAGGCACTTGTTTCTTCGAAAATTCAAGATGGCGAAAAAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy    351 GGACGATGCTCAGGCACTTGTTTCTTCGAAAATTCAAGATGGCGAAAAAT    400

BSNT_06197___    401 ATAAGCTTTGGAAGGTTGATAAATCGAAGAAAGAAATTATTTTCTTCCAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy    401 ATAAGCTTTGGAAGGTTGATAAATCGAAGAAAGAAATTATTTTCTTCCAA    450

BSNT_06197___    451 ACGTACGAAGGTCATTATATTTACCAAAAGACCGACAATCCCTCTAATAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy    451 ACGTACGAAGGTCATTATATTTACCAAAAGACCGACAATCCCTCTAATAT    500

BSNT_06197___    501 GATCGGGCAAGTGGTGCTGCACTTAAACGGTAAAAACGAGGTTGTGTCAT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy    501 GATCGGGCAAGTGGTGCTGCACTTAAACGGTAAAAACGAGGTTGTGTCAT    550

BSNT_06197___    551 ACGACCAGACTACGCTTGAGACCTTCAAGCAAATTCAGAAAGAAAGCTTA    600
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU40380___yy    551 ACGACCAGACTACGCTTGAGACCTTCAAGCAAATCCAGAAAGAAAGCTTA    600

BSNT_06197___    601 ATTACTGAAATGGATGCGGTTGAGCTGTTGTACTATCAAAATCAATTAAA    650
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU40380___yy    601 ATTACTGAAATGGATGCGGTTGAGCTATTGTACTATCAAAATCAATTAAA    650

BSNT_06197___    651 AGAATACAGCACTGTGAAGAGCTGTAAATTCGGCTATGTAGCACAATATC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy    651 AGAATACAGCACTGTGAAGAGCTGTAAATTCGGCTATGTAGCACAATATC    700

BSNT_06197___    701 CGCTGACAAGTACGCAGGTGCTGGCGCCGGTATGGAGAATTACAGTCGAG    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU40380___yy    701 CGCTGACAAGTACGCAGGTGCTGGCGCCGGTATGGAGAATTACGGTCGAG    750

BSNT_06197___    751 TACGATAAAAAAGTGAACGGCGAGAAAAAGACAGTACAAGAGTATTTTAC    800
                     |||||.||||||||||||||.|||||||||||||||||||||||||||||
BSU40380___yy    751 TACGAGAAAAAAGTGAACGGTGAGAAAAAGACAGTACAAGAGTATTTTAC    800

BSNT_06197___    801 TGTGAATGCTTTGGAGAGTACGATTTTAGATACAGATCAATGA    843
                     |||||||||||||||||||||||||||||||||||||||||||
BSU40380___yy    801 TGTGAATGCTTTGGAGAGTACGATTTTAGATACAGATCAATGA    843


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