Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06196 and BSU40370

See Amino acid alignment / Visit BSNT_06196 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:49
# Commandline: needle
#    -asequence dna-align/BSNT_06196___yycJ.1.22522.seq
#    -bsequence dna-align/BSU40370___yycJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06196___yycJ-BSU40370___yycJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06196___yycJ-BSU40370___yycJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06196___yycJ
# 2: BSU40370___yycJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 795
# Identity:     780/795 (98.1%)
# Similarity:   780/795 (98.1%)
# Gaps:           0/795 ( 0.0%)
# Score: 3840.0
# 
#
#=======================================

BSNT_06196___      1 ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy      1 ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTT     50

BSNT_06196___     51 TTACCTTGAAACAGAGGATCACGCATTTTTAGTGGACGCCGGTTTGAGCG    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy     51 TTACCTCGAAACAGAGGATCACGCATTTTTAGTGGACGCCGGTTTGAGCG    100

BSNT_06196___    101 GGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGAT    150
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy    101 GAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGAT    150

BSNT_06196___    151 GTAGACGGCATTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy    151 GTAGACGGCATTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCT    200

BSNT_06196___    201 TGGTGTGGTCGCCAGAAAGTACAAGCTTCCGATCTATGCGAATGAGAAGA    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy    201 TGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCGAATGAGAAGA    250

BSNT_06196___    251 CTTGGAAAGCGATGGAGAATCAAATCGGGAAAATTGACACCGATCAAAAG    300
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU40370___yy    251 CTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAG    300

BSNT_06196___    301 TTTGTATTTCCGATGGAAACAGTGAAGTCGTTCGGCGGACTTGATGTTGA    350
                     |||||||||||.|||||.||.|||||||||||||||||||||||||||||
BSU40370___yy    301 TTTGTATTTCCAATGGAGACGGTGAAGTCGTTCGGCGGACTTGATGTTGA    350

BSNT_06196___    351 ATCATTTGGCGTTTCCCACGATGCGGCCGAGCCGATGTTTTATGTATTCC    400
                     |||.|||||||||||||||||||||||.||.|||||||||||||||||||
BSU40370___yy    351 ATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC    400

BSNT_06196___    401 ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGC    450
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy    401 ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGC    450

BSNT_06196___    451 GACCGGATGAAAGGCATTATCCGTTCAGCGAATGTGTTTGTGTTTGAAAG    500
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU40370___yy    451 GACCGGATGAAAGGCATTATCCGTTCAGCGAATGTATTTGTGTTTGAAAG    500

BSNT_06196___    501 CAATCATGATGTCGGCATGCTGCAAATGGGAAGATACCCGTGGAGCATTA    550
                     ||||||.||||||||.|||||||||||||||||||||||.||||||||||
BSU40370___yy    501 CAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTA    550

BSNT_06196___    551 AGCGGCGGATTTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy    551 AGCGGCGGATTTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCC    600

BSNT_06196___    601 TTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTATTTACCTGGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy    601 TTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTATTTACCTGGC    650

BSNT_06196___    651 GCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy    651 GCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGC    700

BSNT_06196___    701 AGCAGACATTGGCTTCTAAAGGATTTGTGACGGGTGAGACATTTGACTTA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy    701 AGCAGACATTGGCTTCTAAAGGATTTGTGACGGGTGAGACATTTGACTTA    750

BSNT_06196___    751 TACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA    795
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU40370___yy    751 TACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA    795


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