Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06185 and BSU40340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:48
# Commandline: needle
# -asequence dna-align/BSNT_06185___rocD.1.22522.seq
# -bsequence dna-align/BSU40340___rocD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06185___rocD-BSU40340___rocD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06185___rocD-BSU40340___rocD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06185___rocD
# 2: BSU40340___rocD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1239
# Identity: 1181/1239 (95.3%)
# Similarity: 1181/1239 (95.3%)
# Gaps: 33/1239 ( 2.7%)
# Score: 5805.0
#
#
#=======================================
BSNT_06185___ 1 ATGTTGAAACAGAAAACAAGGGGGAATTCAAATATGACAGCTTTATCTAA 50
|||||||||||||||||
BSU40340___ro 1 ---------------------------------ATGACAGCTTTATCTAA 17
BSNT_06185___ 51 ATCCAAAGAAATTATTGATCAGACGTCTCATTACGGAGCCAACAATTATC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 18 ATCCAAAGAAATTATTGATCAGACGTCTCATTACGGAGCCAACAATTATC 67
BSNT_06185___ 101 ATCCGCTCCCGATTGTTATTTCTGAAGCGCTGGGTTCTTGGGTAAAGGAC 150
|.|||||||||||||||||||||||||||||||||.||||||||||||||
BSU40340___ro 68 ACCCGCTCCCGATTGTTATTTCTGAAGCGCTGGGTGCTTGGGTAAAGGAC 117
BSNT_06185___ 151 CCGGAAGGCAATGAATATATGGATATGCTGAGTGCTTATTCTGCGGTAAA 200
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU40340___ro 118 CCGGAAGGCAATGAATATATGGATATGCTGAGTGCTTACTCTGCGGTAAA 167
BSNT_06185___ 201 CCAGGGGCACAGACACCCGAAAATCATTCAGGCATTAAAGGATCAGGCTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 168 CCAGGGGCACAGACACCCGAAAATCATTCAGGCATTAAAGGATCAGGCTG 217
BSNT_06185___ 251 ATAAAATCACCCTCACGTCACGCGCGTTTCATAACGATCAGCTTGGGCCG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 218 ATAAAATCACCCTCACGTCACGCGCGTTTCATAACGATCAGCTTGGGCCG 267
BSNT_06185___ 301 TTTTACGAAAAAACAGCTAAACTGACAGGCAAAGAGATGATTCTGCCGAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 268 TTTTACGAAAAAACAGCTAAACTGACAGGCAAAGAGATGATTCTGCCGAT 317
BSNT_06185___ 351 GAATACAGGAGCCGAAGCGGTTGAATCCGCGGTGAAAGCGGCGAGACGCT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 318 GAATACAGGAGCCGAAGCGGTTGAATCCGCGGTGAAAGCGGCGAGACGCT 367
BSNT_06185___ 401 GGGCGTATGAAGTGAAGGGCGTAGCTGACAATCAAGCGGAAATTATCGCA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 368 GGGCGTATGAAGTGAAGGGCGTAGCTGACAATCAAGCGGAAATTATCGCA 417
BSNT_06185___ 451 TGTGTCGGGAACTTCCACGGCCGCACGATGCTGGCGGTATCTCTTTCTTC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 418 TGTGTCGGGAACTTCCACGGCCGCACGATGCTGGCGGTATCTCTTTCTTC 467
BSNT_06185___ 501 TGAAGAGGAATATAAACGAGGATTCGGCCCGATGCTTCCGGGAATCAAAC 550
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU40340___ro 468 TGAAGAGGAATATAAACGAGGATTCGGCCCGATGCTTCCAGGAATCAAAC 517
BSNT_06185___ 551 TCATTCCTTACGGCGATGTGGAAGCGCTTCGACAGGCCATTACGCCGAAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 518 TCATTCCTTACGGCGATGTGGAAGCGCTTCGACAGGCCATTACGCCGAAT 567
BSNT_06185___ 601 ACAGCGGCATTCTTGTTTGAACCGATTCAAGGCGAAGCGGGTATTGTAAT 650
|||||||||||||||||||||||||||||||||||||||||.|||||.||
BSU40340___ro 568 ACAGCGGCATTCTTGTTTGAACCGATTCAAGGCGAAGCGGGCATTGTGAT 617
BSNT_06185___ 651 TCCGCCGGAAGGATTTTTACAGGAAGCGGCGGCGATTTGTAAGGAAGAGA 700
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 618 TCCGCCTGAAGGATTTTTACAGGAAGCGGCGGCGATTTGTAAGGAAGAGA 667
BSNT_06185___ 701 ATGTCTTGTTTATTGCGGATGAAATTCAAACGGGTCTCGGACGTACAGGC 750
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU40340___ro 668 ATGTCTTGTTTATTGCGGATGAAATTCAGACGGGTCTCGGACGTACAGGC 717
BSNT_06185___ 751 AAGACGTTTGCCTGTGACTGGGACGGCATTGTTCCGGATATGTATATCTT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 718 AAGACGTTTGCCTGTGACTGGGACGGCATTGTTCCGGATATGTATATCTT 767
BSNT_06185___ 801 GGGCAAAGCGCTTGGCGGCGGTGTGTTCCCGATCTCATGCATTGCGGCGG 850
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU40340___ro 768 GGGCAAAGCGCTTGGCGGCGGTGTGTTCCCGATCTCTTGCATTGCGGCGG 817
BSNT_06185___ 851 ACCGCGAGATCTTAGGCGTGTTTAACCCTGGCTCACACGGCTCCACATTT 900
|||||||||||.|||||||||||||||||||||||||||||||.||||||
BSU40340___ro 818 ACCGCGAGATCCTAGGCGTGTTTAACCCTGGCTCACACGGCTCAACATTT 867
BSNT_06185___ 901 GGCGGAAACCCGCTTGCATGTGCAGTGTCTATTGCCTCATTGGAAGTGCT 950
||.|||||||||||||||||||||||||||||.||.|||||.||||||||
BSU40340___ro 868 GGTGGAAACCCGCTTGCATGTGCAGTGTCTATCGCTTCATTAGAAGTGCT 917
BSNT_06185___ 951 GGAGGATGAAAAGCTGGCGGATCGTTCTCTTGAGCTTGGAGAATACTTTA 1000
|||||||||||||||||||||||||||||||||.|||||.||||||||||
BSU40340___ro 918 GGAGGATGAAAAGCTGGCGGATCGTTCTCTTGAACTTGGTGAATACTTTA 967
BSNT_06185___ 1001 AAAGCGAGCTTGAGAGCATTGACAACCCGGTTATTAAAGAAGTCCGCGGC 1050
||||||||||||||||.|||||||.|||.||.||||||||||||||||||
BSU40340___ro 968 AAAGCGAGCTTGAGAGTATTGACAGCCCTGTCATTAAAGAAGTCCGCGGC 1017
BSNT_06185___ 1051 AGAGGGCTGTTTATCGGTGTGGAATTGACTGAAGCGGCACGTCCGTATTG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40340___ro 1018 AGAGGGCTGTTTATCGGTGTGGAATTGACTGAAGCGGCACGTCCGTATTG 1067
BSNT_06185___ 1101 TGAGCGTTTGAAGGAAGAAGGGCTTTTATGCAAGGAAACGCATGATACAG 1150
||||||||||||||||||.||.||||||||||||||||||||||||||||
BSU40340___ro 1068 TGAGCGTTTGAAGGAAGAGGGACTTTTATGCAAGGAAACGCATGATACAG 1117
BSNT_06185___ 1151 TCATTCGTTTTGCACCGCCATTAATCATTTCCAAAGAGGATTTGGATTGG 1200
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU40340___ro 1118 TCATTCGTTTTGCACCGCCATTAATCATTTCCAAAGAGGACTTGGATTGG 1167
BSNT_06185___ 1201 GCGATAGAGAAAATTAAGCACGTGCTGCAAAACGCATAA 1239
||||||||||||||||||||||||||||.||||||||||
BSU40340___ro 1168 GCGATAGAGAAAATTAAGCACGTGCTGCGAAACGCATAA 1206
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