Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06184 and BSU40330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:48
# Commandline: needle
# -asequence dna-align/BSNT_06184___rocE.1.22522.seq
# -bsequence dna-align/BSU40330___rocE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06184___rocE-BSU40330___rocE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06184___rocE-BSU40330___rocE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06184___rocE
# 2: BSU40330___rocE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1404
# Identity: 1375/1404 (97.9%)
# Similarity: 1375/1404 (97.9%)
# Gaps: 0/1404 ( 0.0%)
# Score: 6759.0
#
#
#=======================================
BSNT_06184___ 1 GTGAATACAAACCAAGATAACGGAAATCAGCTCCAGCGGACAATGAAATC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 1 GTGAATACAAACCAAGATAACGGAAATCAGCTCCAGCGGACAATGAAATC 50
BSNT_06184___ 51 ACGCCACTTGTTCATGATTTCATTGGGCGGAGTGATCGGAACCGGTTTCT 100
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 51 ACGCCATTTGTTCATGATTTCATTGGGCGGAGTGATCGGAACCGGTTTCT 100
BSNT_06184___ 101 TCCTTGGAACCGGGTTTACCATTAACCAAGCGGGACCGCTCGGCGCGGTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 101 TCCTTGGAACCGGGTTTACCATTAACCAAGCGGGACCGCTCGGCGCGGTT 150
BSNT_06184___ 151 CTGTCCTATTTAGTGGGCGGCTTTATCATGTTTTTGACGATGCTCTGCTT 200
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU40330___ro 151 CTGTCCTATTTAGTGGGCGGCTTTATCATGTTTTTGACCATGCTCTGCTT 200
BSNT_06184___ 201 AGGAGAGCTGGCAGTCGCCTTTCCTGTGTCAGGGTCCTTCCAGACCTATG 250
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU40330___ro 201 AGGAGAGCTGGCAGTCGCCTTTCCTGTGTCGGGGTCCTTCCAGACCTATG 250
BSNT_06184___ 251 CGACAAAATTTATCAGCCCGGCCTTCGGGTTTGCGTTCGGCTGGCTGTAC 300
|.||.|||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 251 CCACGAAATTTATCAGCCCGGCCTTCGGGTTTGCGTTCGGCTGGCTGTAC 300
BSNT_06184___ 301 TGGCTCGGCTGGGCGGTTACATGCGCCATTGAATTCTTATCAGCGGGGCA 350
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU40330___ro 301 TGGCTCGGCTGGGCGGTTACATGCGCCATTGAATTTTTATCAGCGGGGCA 350
BSNT_06184___ 351 GCTGATGCAACGATGGTTTCCGCATATAGACGTGTGGATCTGGTGTCTGG 400
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU40330___ro 351 GCTGATGCAACGCTGGTTTCCGCATATAGACGTGTGGATCTGGTGTCTGG 400
BSNT_06184___ 401 TCTTTGCGGCACTGATGTTTATTTTAAATGCGATCACCACAAAAGCCTTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 401 TCTTTGCGGCACTGATGTTTATTTTAAATGCGATCACCACAAAAGCCTTT 450
BSNT_06184___ 451 GCGGAATCAGAATTCTGGTTTTCAGGCATTAAAATTTTGATTATCCTTTT 500
||||||||.|||||||||||.|||||||||||||||||||||||||||||
BSU40330___ro 451 GCGGAATCTGAATTCTGGTTCTCAGGCATTAAAATTTTGATTATCCTTTT 500
BSNT_06184___ 501 ATTTATTATTCTCGGCGGAGCTGCCATGTTTGGCCTGATTGATCTGAAGG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 501 ATTTATTATTCTCGGCGGAGCTGCCATGTTTGGCCTGATTGATCTGAAGG 550
BSNT_06184___ 551 GCGGAGAGCAGGCGCCGTTTTTGACACATTTTTATGAAGACGGGTTATTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 551 GCGGAGAGCAGGCGCCGTTTTTGACACATTTTTATGAAGACGGGTTATTT 600
BSNT_06184___ 601 CCGAACGGCATAAAGGCAATGCTGATTACGATGATTACCGTGAACTTTGC 650
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU40330___ro 601 CCGAACGGCATAAAGGCAATGCTGATTACGATGATTACTGTGAACTTTGC 650
BSNT_06184___ 651 GTTTCAGGGGACTGAGCTGATCGGGGTTGCAGCCGGAGAAAGTGAAGACC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 651 GTTTCAGGGGACTGAGCTGATCGGGGTTGCAGCCGGAGAAAGTGAAGACC 700
BSNT_06184___ 701 CTGAAAAAACGATTCCACGGTCAATCAAACAGACAGTATGGAGAACGCTT 750
||||||||||||||||.|||||.|||||||||||||||||||||||||||
BSU40330___ro 701 CTGAAAAAACGATTCCGCGGTCCATCAAACAGACAGTATGGAGAACGCTT 750
BSNT_06184___ 751 GTCTTCTTTGTGCTTTCAATCATTGTCATTGCCGGCATGATTCCGTGGAA 800
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 751 GTGTTCTTTGTGCTTTCAATCATTGTCATTGCCGGCATGATTCCGTGGAA 800
BSNT_06184___ 801 ACAGGCGGGTGTCGTGGAAAGTCCATTTGTTGCCGTATTTGAGCAAATCG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 801 ACAGGCGGGTGTCGTGGAAAGTCCATTTGTTGCCGTATTTGAGCAAATCG 850
BSNT_06184___ 851 GGATCCCATATGCAGCTGATATCATGAACTTTGTTATTTTAATCGCGCTG 900
|.||||||||||||||||||||||||||||||||||||||||||||.|||
BSU40330___ro 851 GAATCCCATATGCAGCTGATATCATGAACTTTGTTATTTTAATCGCACTG 900
BSNT_06184___ 901 TTATCTGTTGCGAATTCAGGTTTATACGCATCGACACGTATTCTGTACGC 950
||||||||||||||.|||||||||||||||||.|||||||||||||||||
BSU40330___ro 901 TTATCTGTTGCGAACTCAGGTTTATACGCATCAACACGTATTCTGTACGC 950
BSNT_06184___ 951 GATGGCGAATGAAGGACAGGCCTTCAAAGCGCTCGGAAAAACAAATCAGC 1000
||||||||||||||||||.||||||||||||||.||.|||||||||||||
BSU40330___ro 951 GATGGCGAATGAAGGACAAGCCTTCAAAGCGCTTGGCAAAACAAATCAGC 1000
BSNT_06184___ 1001 GCGGTGTGCCGATGTACTCGTTAATCGTAACGATGGCTGTGGCCTGCCTA 1050
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 1001 GCGGTGTACCGATGTACTCGTTAATCGTAACGATGGCTGTGGCCTGCCTA 1050
BSNT_06184___ 1051 TCACTTCTGACAAAGTTTGCGCAGGCTGAAACTGTATATATGGTACTGTT 1100
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU40330___ro 1051 TCACTTCTGACAAAGTTTGCGCAGGCTGAAACCGTATATATGGTACTGTT 1100
BSNT_06184___ 1101 ATCTTTGGCGGGTATGAGCGCGCAGGTCGGCTGGATTACGATCTCGCTTT 1150
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU40330___ro 1101 ATCTTTGGCGGGCATGAGCGCGCAGGTCGGCTGGATTACGATCTCGCTTT 1150
BSNT_06184___ 1151 CCCAAATCATGTTTAGACGCAAATATATCCGCGAAGGCGGGAAGATAGAA 1200
|||||||||||||.|||||||||||||||||.||.|||||||||||||||
BSU40330___ro 1151 CCCAAATCATGTTCAGACGCAAATATATCCGTGAGGGCGGGAAGATAGAA 1200
BSNT_06184___ 1201 GATTTGAAATTTAAAACACCGCTGTACCCGGTGCTTCCGCTGATCGGCCT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 1201 GATTTGAAATTTAAAACACCGCTGTACCCGGTGCTTCCGCTGATCGGCCT 1250
BSNT_06184___ 1251 AACATTAAATACGGTCGTGCTCATCAGTCTTGCATTTGATCCGGAGCAGC 1300
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40330___ro 1251 AACGTTAAATACGGTCGTGCTCATCAGTCTTGCATTTGATCCGGAGCAGC 1300
BSNT_06184___ 1301 GTATCGCGCTGTATTGCGGCGTACCGTTTATGGTCATTTGCTACATCATT 1350
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU40330___ro 1301 GTATCGCGCTGTATTGCGGCGTACCGTTTATGATCATTTGCTACATCATT 1350
BSNT_06184___ 1351 TATCATGTCGTCATTAAAAAACGCCAGCAGGCGAATCGTCAGCTAGAGCT 1400
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU40330___ro 1351 TATCATGTCGTCATTAAAAAACGCCAGCAGGCAAATCGTCAGCTAGAGCT 1400
BSNT_06184___ 1401 TTAA 1404
||||
BSU40330___ro 1401 TTAA 1404
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