Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06180 and BSU40290

See Amino acid alignment / Visit BSNT_06180 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence dna-align/BSNT_06180___yycN.1.22522.seq
#    -bsequence dna-align/BSU40290___yycN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06180___yycN-BSU40290___yycN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06180___yycN-BSU40290___yycN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06180___yycN
# 2: BSU40290___yycN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 471
# Identity:     455/471 (96.6%)
# Similarity:   455/471 (96.6%)
# Gaps:           0/471 ( 0.0%)
# Score: 2211.0
# 
#
#=======================================

BSNT_06180___      1 ATGACAATCATGCTGACCCCAATGCAGTCAGAAGAATTTCGGTCTTATCT     50
                     ||||||||.|||||.|||||.||||||.||||||||||||||||||||||
BSU40290___yy      1 ATGACAATTATGCTAACCCCTATGCAGACAGAAGAATTTCGGTCTTATCT     50

BSNT_06180___     51 CACATACACAACAAAGCATTACGCGGAAGAAAAGGTAAAAGCGGGAACAT    100
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40290___yy     51 CACGTACACAACAAAGCATTACGCGGAAGAAAAGGTAAAAGCGGGAACAT    100

BSNT_06180___    101 GGCTGCCTGAAGATGCACAGCTTTTGTCTAAGCAGGCGTTTACTGATCTG    150
                     ||||||||||||||||.|||||||||||||||||||.|||||||||||||
BSU40290___yy    101 GGCTGCCTGAAGATGCCCAGCTTTTGTCTAAGCAGGTGTTTACTGATCTG    150

BSNT_06180___    151 CTTCCGAGAGGGCTGGAAACACCCCATCACCATTTGTGGAGCCTCAAGCT    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU40290___yy    151 CTTCCGAGAGGGCTCGAAACACCCCATCACCATTTGTGGAGCCTCAAGCT    200

BSNT_06180___    201 GAATGAAAAGGATACCGTTGGCTGGCTCTGGATACATGCTGAACCGGAGC    250
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU40290___yy    201 GAATGAAAAGGATATCGTTGGCTGGCTCTGGATACATGCTGAACCGGAGC    250

BSNT_06180___    251 ATCCGCAGCAGGAAGCGTTTATTTATGATTTCGGGTTATATGAACCGTAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40290___yy    251 ATCCGCAGCAGGAAGCGTTTATTTATGATTTCGGGTTATATGAACCGTAT    300

BSNT_06180___    301 CGGGGAAAGGGCTACGCAAAGCAAGCATTGGCAGCATTAGATCATACGGC    350
                     ||||||||||||||||||||||||||||||||.|||||||||||..||||
BSU40290___yy    301 CGGGGAAAGGGCTACGCAAAGCAAGCATTGGCGGCATTAGATCAAGCGGC    350

BSNT_06180___    351 ACGCAGCATGGGAATCCGCAAGCTGTCCCTTCATGTCTTTGCTCATAATC    400
                     ||||||.|||||||||||||||||||||||||||||||||||.|||||||
BSU40290___yy    351 ACGCAGTATGGGAATCCGCAAGCTGTCCCTTCATGTCTTTGCCCATAATC    400

BSNT_06180___    401 AGACGGCGCGAAAGCTATATGAGCAAACCGGATTTCAAGAAACAGACGTA    450
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU40290___yy    401 AGACGGCTCGAAAGCTATATGAGCAAACCGGATTTCAAGAAACAGACGTA    450

BSNT_06180___    451 GTGATGAGCAAGAAGATTTAA    471
                     |||||||||||||||.|||||
BSU40290___yy    451 GTGATGAGCAAGAAGCTTTAA    471


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