Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06178 and BSU40270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:47
# Commandline: needle
# -asequence dna-align/BSNT_06178___yycP.1.22522.seq
# -bsequence dna-align/BSU40270___yycP.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06178___yycP-BSU40270___yycP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06178___yycP-BSU40270___yycP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06178___yycP
# 2: BSU40270___yycP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1164
# Identity: 1093/1164 (93.9%)
# Similarity: 1093/1164 (93.9%)
# Gaps: 6/1164 ( 0.5%)
# Score: 5192.5
#
#
#=======================================
BSNT_06178___ 1 ATGAAAAAGTGGATGATTACCATCGCCATGCTGATTCTCGCAGGAATCGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40270___yy 1 ATGAAAAAGTGGATGATTACCATCGCCATGCTGATTCTCGCAGGAATCGC 50
BSNT_06178___ 51 ACTATTTGTCTTCATTTTTCCT------AGCCATAAAACTGTAAGTCACC 94
|||||||||||||||||.|||| |||||||||||.||.|||||.|
BSU40270___yy 51 ACTATTTGTCTTCATTTCTCCTCTCAAAAGCCATAAAACCGTGAGTCAGC 100
BSNT_06178___ 95 AGGATCTTCGAGACTCCGGTTTCTTGGATGACAAAGAAGTCCTGTTATAT 144
|||||||..||.|..|||.||||.||||||||||||||||||||.|.|||
BSU40270___yy 101 AGGATCTCAGAAATCCCGATTTCCTGGATGACAAAGAAGTCCTGCTGTAT 150
BSNT_06178___ 145 TTTTCAACCTCTGCGGATCAAGATGCATTTGGCGGCGGGAAAAGCTATGC 194
||.|||.||||||||||||||||||||||||||||||||||||||||.||
BSU40270___yy 151 TTCTCATCCTCTGCGGATCAAGATGCATTTGGCGGCGGGAAAAGCTACGC 200
BSNT_06178___ 195 CTTGTTTATCAGCCAGGACGGGTCGCTGTCTTCCTTTCAGATGAAGGGCC 244
|.|||||||||||||.||||||.|||||||||||||||||||||||||||
BSU40270___yy 201 CCTGTTTATCAGCCATGACGGGACGCTGTCTTCCTTTCAGATGAAGGGCC 250
BSNT_06178___ 245 TTGAGCTGGGATCAGCCAAGGTTCACGGCGACAGTGTGATGCTGGAGGAC 294
||||||||||.|||||.|||||||||||.|||||.|||||||||||||||
BSU40270___yy 251 TTGAGCTGGGCTCAGCAAAGGTTCACGGTGACAGCGTGATGCTGGAGGAC 300
BSNT_06178___ 295 AAAAACAAGATTTATACGATCAAAAACGGTCTGCGCTCCCATAAAAGAAC 344
|||||||.|||||||||||||||||||||.||||||||||||||||||||
BSU40270___yy 301 AAAAACACGATTTATACGATCAAAAACGGCCTGCGCTCCCATAAAAGAAC 350
BSNT_06178___ 345 CTATCAGCACACAGGCGACAGCGCAGGCTTTCTGCAAAACACGGACGGCT 394
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU40270___yy 351 CTATCAGCACACAGGCGACAGCGCGGGCTTTCTGCAAAACACGGACGGCT 400
BSNT_06178___ 395 TTTATACCTTATACAACTCCGGCTACGACAAAAAGGGAGACGGGTACCGC 444
||||.||||||||||||||||||||||||||||||||||||||.||||||
BSU40270___yy 401 TTTACACCTTATACAACTCCGGCTACGACAAAAAGGGAGACGGATACCGC 450
BSNT_06178___ 445 TCAGAGCTGTACCGCCAGATGAACGGAGAGTGGAAAAAAGACGTCATCCC 494
|||||||||||||||||.|||.||||||||||||||||||||||||||||
BSU40270___yy 451 TCAGAGCTGTACCGCCAAATGGACGGAGAGTGGAAAAAAGACGTCATCCC 500
BSNT_06178___ 495 CTACTACATCCGGGCCTCCGGTTTTCATAAGGGCACCATTTACGCACTCG 544
||||||||||||.|||||||||||.|||.|.|||.|||||||||||||||
BSU40270___yy 501 CTACTACATCCGAGCCTCCGGTTTCCATGATGGCGCCATTTACGCACTCG 550
BSNT_06178___ 545 TTCCGACAACTGACGAAAAAGGTTATCAGCTCCTTCAGATTCAAGCAGAT 594
|.||||||..|||||.||||||.|||||||||||||||||||||||||||
BSU40270___yy 551 TCCCGACAGATGACGGAAAAGGCTATCAGCTCCTTCAGATTCAAGCAGAT 600
BSNT_06178___ 595 CAAAGGAAGCTCACTTATCACAAGATAACAGAATGGCAGTACCGGGAAGG 644
||.|.||||||.||.||||.||..|||||.||||||||||||||||||||
BSU40270___yy 601 CAGAAGAAGCTTACCTATCTCAGCATAACGGAATGGCAGTACCGGGAAGG 650
BSNT_06178___ 645 AGCCTCAGTCGAATCCCAGCTTGCTGTGGACGACCAAGCTGTTTATGTTA 694
||||||||||||||||||.|||||.|||||||||||||||||.|||||||
BSU40270___yy 651 AGCCTCAGTCGAATCCCAACTTGCCGTGGACGACCAAGCTGTGTATGTTA 700
BSNT_06178___ 695 TGGTTCGCGGCCAAAAAGCCCGCAATCTCTATCAAATGGTCAAGATCAAC 744
|||||||||||||||||||||.|.||||||||||||||||||||||||||
BSU40270___yy 701 TGGTTCGCGGCCAAAAAGCCCACGATCTCTATCAAATGGTCAAGATCAAC 750
BSNT_06178___ 745 AAAAAAAGCGGCAAAGTAGAGCTGCACGACATCGACGAATACAAAAACGA 794
||||||||||||.||||||||||||||||.||||.|||||||||||||||
BSU40270___yy 751 AAAAAAAGCGGCGAAGTAGAGCTGCACGATATCGCCGAATACAAAAACGA 800
BSNT_06178___ 795 CGAACAAACGATATACAGCTCCATGCCCTTCAGCTTTAAAAACAGCTTTT 844
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40270___yy 801 CGAACAAACGATATACAGCTCCATGCCCTTCAGCTTTAAAAACAGCTTTT 850
BSNT_06178___ 845 TCCCTTATGACGGGAACCTGTATTTCATTGACGGCTTCGGAAAGGTACAC 894
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40270___yy 851 TCCCTTATGACGGGAACCTGTATTTCATTGACGGCTTCGGAAAGGTACAC 900
BSNT_06178___ 895 AAAATTGATGCCAAGACAGGAAAAACAAGCATCGCCTTCACCTTTTCCCA 944
|||||.||||||||||||||||||||||||||||.|||||||.||||||.
BSU40270___yy 901 AAAATCGATGCCAAGACAGGAAAAACAAGCATCGTCTTCACCCTTTCCCC 950
BSNT_06178___ 945 GGACAAAATGAAAGCCGATTTCAAAGAAATCACCCAAAAAGGCAGCAGCC 994
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU40270___yy 951 GGACAAAATGAAAGCCGAATTCAAAGAAATCACCCAAAAAGGCAGCAGCC 1000
BSNT_06178___ 995 TCTATTTCTTCACATACACGCATAACAAGCCTGCCTACATTGAACAGTAC 1044
||||||||||||||||||||.||.||||||||||||||||||||||||||
BSU40270___yy 1001 TCTATTTCTTCACATACACGTATCACAAGCCTGCCTACATTGAACAGTAC 1050
BSNT_06178___ 1045 AGCCTGAAAACCGGAAAGAAATTGAAAGAAAAAGAGATTGGGAAGGTAAA 1094
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU40270___yy 1051 AGCCTGAAAACCGGAAAGAAAATGAAAGAAAAAGAGATTGGGAAGGTAAA 1100
BSNT_06178___ 1095 GGATGTCGTGACGCCGAAGAGTCATTTGAAGCTGTATGATTTTGAGGTGA 1144
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU40270___yy 1101 GGATGTCGTGACGCCGAAGAGTCATTTGAAGCTGTATGATGTTGAGGTGA 1150
BSNT_06178___ 1145 TGAAGAGGTTTTAA 1158
||||||||||||||
BSU40270___yy 1151 TGAAGAGGTTTTAA 1164
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