Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06173 and BSU40240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence dna-align/BSNT_06173___yycS.1.22522.seq
# -bsequence dna-align/BSU40240___yycS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06173___yycS-BSU40240___yycS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06173___yycS-BSU40240___yycS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06173___yycS
# 2: BSU40240___yycS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 414
# Identity: 394/414 (95.2%)
# Similarity: 394/414 (95.2%)
# Gaps: 0/414 ( 0.0%)
# Score: 1890.0
#
#
#=======================================
BSNT_06173___ 1 TTGCGCTTTAGATGGATTTGGCTTTTTGTGATCATGTTGCTGCTTGCTGG 50
|||||||||||||||.||||||||||||||||.||||||||||||||||.
BSU40240___yy 1 TTGCGCTTTAGATGGGTTTGGCTTTTTGTGATTATGTTGCTGCTTGCTGA 50
BSNT_06173___ 51 GTGTCAGCCGTCTTATTGGGTGTTGGAGAAGGATCGAATCGGTGAAGGCA 100
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU40240___yy 51 GTGTCAGCCATCTTATTGGGTGTTGGAGAAGGATCGAATCGGTGAAGGCA 100
BSNT_06173___ 101 GTCCAGACTTAGAAATATACGCTAATTATCTCCAAATGCATGATGACGTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40240___yy 101 GTCCAGACTTAGAAATATACGCTAATTATCTCCAAATGCATGATGACGTG 150
BSNT_06173___ 151 AAAGGATATCAAGTCTTCACCATTTTAGAAGGGAGAAAAATGGTTATTGT 200
|||||||||||||||||||||||.|.||||||.|.|||||||||..|.||
BSU40240___yy 151 AAAGGATATCAAGTCTTCACCATATCAGAAGGCAAAAAAATGGTCGTCGT 200
BSNT_06173___ 201 GTCTCTCGGAAGCAGCGAGAAAGATAAGAAGCTTGAAGTGTCAGACGTCA 250
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU40240___yy 201 GTCTCTCGGAAGCAGCGAGAAAGATAAGAAGCTTGAAGTGTCGGACGTCA 250
BSNT_06173___ 251 AATTCTCACCTAAAGAAACGATTGTAACTGTGAAACGAAAACCTGCTCCT 300
||||||||.|||||||||||||||||||||||.|.|||||||||||||||
BSU40240___yy 251 AATTCTCATCTAAAGAAACGATTGTAACTGTGGAGCGAAAACCTGCTCCT 300
BSNT_06173___ 301 ACGGCAAATGAGAAAAACCCTTATATTTTGATTGGACTGGACAAAATCGA 350
||||||||||||||||||||||.||||||||||||||||||||||||.||
BSU40240___yy 301 ACGGCAAATGAGAAAAACCCTTTTATTTTGATTGGACTGGACAAAATTGA 350
BSNT_06173___ 351 AGGGGATTTAATTGTCCAAGACGAATCAGGAGATCGCTTTGAAGAAACAG 400
|||||||||||||||.|||||||||.||||||||||||||||||||||.|
BSU40240___yy 351 AGGGGATTTAATTGTTCAAGACGAAACAGGAGATCGCTTTGAAGAAACGG 400
BSNT_06173___ 401 ATTACCAGCAATAA 414
||||||||||||||
BSU40240___yy 401 ATTACCAGCAATAA 414
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