Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06150 and BSU40130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence dna-align/BSNT_06150___yydK.1.22522.seq
# -bsequence dna-align/BSU40130___yydK.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06150___yydK-BSU40130___yydK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06150___yydK-BSU40130___yydK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06150___yydK
# 2: BSU40130___yydK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 712
# Identity: 694/712 (97.5%)
# Similarity: 694/712 (97.5%)
# Gaps: 2/712 ( 0.3%)
# Score: 3396.0
#
#
#=======================================
BSNT_06150___ 1 ATGTTAAAATACCAGCAAATCGCAGCGGAAATTGAAACATATATAGAAGA 50
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU40130___yy 1 ATGTTAAAATACCAGCAAATCGCAACGGAAATTGAAACATATATAGAAGA 50
BSNT_06150___ 51 ACACCAGCTTCAGCAGGGAGACAAACTGCCAGTCCTGGAAACCCTCATGG 100
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU40130___yy 51 ACACCAGCTTCAGCAGGGAGACAAACTGCCAGTCCTAGAAACCCTCATGG 100
BSNT_06150___ 101 CCCAGTTTGAAGTCAGCAAAAGCACAATTACAAAGTCCCTCGAGCTATTA 150
|||||||||||||||||||||||||.||.|||||||||||||||||||||
BSU40130___yy 101 CCCAGTTTGAAGTCAGCAAAAGCACCATCACAAAGTCCCTCGAGCTATTA 150
BSNT_06150___ 151 GAGCAAAAAGGCGCGATCTTTCAAGTCAGAGGAAGCGGCATTTTCGTCAG 200
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU40130___yy 151 GAGCAAAAAGGCGCGATCTTTCAGGTCAGAGGAAGCGGCATTTTCGTCAG 200
BSNT_06150___ 201 AAAACATAAACGAAAAGGCTATATCAGCCTTCTGTCGAATCAGGGGTTTA 250
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU40130___yy 201 AAAACATAAACGAAAAGGCTATATCAGCCTTCTGTCGAATCAGGGATTTA 250
BSNT_06150___ 251 AAAAAGATCTCGAGGATTTCAACGTCACCTCAAAAGTCATCGAACTGGAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy 251 AAAAAGATCTCGAGGATTTCAACGTCACCTCAAAAGTCATCGAACTGGAC 300
BSNT_06150___ 301 GTGAGAAAGCCGACACCGGAAGCGGCGGAAAATCTGAACATCGAAATAAA 350
|||||||||||.||||||||||||||||||||.||||||||||.|||..|
BSU40130___yy 301 GTGAGAAAGCCAACACCGGAAGCGGCGGAAAACCTGAACATCGGAATGGA 350
BSNT_06150___ 351 CGAAGACATCTACTATGTCAAAAGGGTCCGCTACATCAACGGCCAGACCC 400
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy 351 CGAGGACATCTACTATGTCAAAAGGGTCCGCTACATCAACGGCCAGACCC 400
BSNT_06150___ 401 TTTGCTACGAAGAATCCTATTACAACAAATCCATCGTGACGTATTTAAAC 450
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU40130___yy 401 TTTGCTACGAAGAATCCTATTACACCAAATCCATCGTGACGTATTTAAAC 450
BSNT_06150___ 451 AACGAAATCGTTTCCCACTCCATCTTCCATTACATCCGGGAAGGACTGGG 500
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU40130___yy 451 AACGAAATCGTCTCCCACTCCATCTTCCATTACATCCGGGAAGGACTGGG 500
BSNT_06150___ 501 GTTGAAGATTGGTTTTTCTGATTTGTTTCTGCACGTGGGCCAGCTTAATG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy 501 GTTGAAGATTGGTTTTTCTGATTTGTTTCTGCACGTGGGCCAGCTTAATG 550
BSNT_06150___ 551 AGGAAGAAGCGGAATATTTGGGATTAGAGGCTGGACTGCCGAAGCTGTAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy 551 AGGAAGAAGCGGAATATTTGGGATTAGAGGCTGGACTGCCGAAGCTGTAT 600
BSNT_06150___ 601 ATAGAAAGTATTTTTCACCTGACAAATGGGCAGCCGTTTGATTACTCGAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy 601 ATAGAAAGTATTTTTCACCTGACAAATGGGCAGCCGTTTGATTACTCGAA 650
BSNT_06150___ 651 GATTTCGTATAATTATGAGCAGTCGCAGTTTGTGGTGCAGGCTAATAGTT 700
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU40130___yy 651 GATTTCGTATAATTATGAGCAGTCGCAGTTTGTGGTACAGGCTAATAGTT 700
BSNT_06150___ 701 TTTTATTGTGA- 711
|||||||.| |
BSU40130___yy 701 TTTTATTAT-AG 711
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