Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06146 and BSU40090

See Amino acid alignment / Visit BSNT_06146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:44
# Commandline: needle
#    -asequence dna-align/BSNT_06146___ahpC.1.22522.seq
#    -bsequence dna-align/BSU40090___ahpC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06146___ahpC-BSU40090___ahpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06146___ahpC-BSU40090___ahpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06146___ahpC
# 2: BSU40090___ahpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity:     559/564 (99.1%)
# Similarity:   559/564 (99.1%)
# Gaps:           0/564 ( 0.0%)
# Score: 2775.0
# 
#
#=======================================

BSNT_06146___      1 ATGTCTTTAATCGGTAAAGAAGTACTTCCATTCGAAGCAAAAGCATTCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40090___ah      1 ATGTCTTTAATCGGTAAAGAAGTACTTCCATTCGAAGCAAAAGCATTCAA     50

BSNT_06146___     51 AAACGGTGAATTCATCGATGTAACAAACGAAGATTTGAAAGGCCAATGGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40090___ah     51 AAACGGTGAATTCATCGATGTAACAAACGAAGATTTGAAAGGCCAATGGA    100

BSNT_06146___    101 GCGTATTCTGCTTCTACCCAGCAGATTTCTCTTTCGTATGCCCAACTGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40090___ah    101 GCGTATTCTGCTTCTACCCAGCAGATTTCTCTTTCGTATGCCCAACTGAG    150

BSNT_06146___    151 CTTGAAGATCTTCAAGAACAATATGCTGCTCTTAAAGAATTAGGTGTTGA    200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU40090___ah    151 CTTGAAGATCTTCAAGAACAATATGCTGCACTTAAAGAATTAGGTGTTGA    200

BSNT_06146___    201 AGTCTACTCTGTTTCTACAGATACTCACTTCGTACACAAAGGCTGGCATG    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40090___ah    201 AGTATACTCTGTTTCTACAGATACTCACTTCGTACACAAAGGCTGGCATG    250

BSNT_06146___    251 ACAGCTCTGAAAAAATCAGCAAAATCACTTACGCAATGATCGGCGACCCA    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU40090___ah    251 ACAGCTCTGAAAAAATCAGCAAAATCACTTACGCAATGATCGGTGACCCA    300

BSNT_06146___    301 TCTCAAACGATCTCTCGCAACTTCGATGTTCTTGACGAAGAAACTGGCCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40090___ah    301 TCTCAAACGATCTCTCGCAACTTCGATGTTCTTGACGAAGAAACTGGCCT    350

BSNT_06146___    351 TGCTGACCGCGGAACATTCATCATCGATCCAGATGGCGTTATCCAAACTG    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU40090___ah    351 TGCTGACCGCGGAACATTCATCATCGATCCAGACGGCGTTATCCAAACTG    400

BSNT_06146___    401 TTGAAATTAATGCAGGCGGTATCGGCCGTGACGCAAGCAACCTTGTAAAC    450
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU40090___ah    401 TTGAAATCAATGCAGGCGGTATCGGCCGTGACGCAAGCAACCTTGTAAAC    450

BSNT_06146___    451 AAAGTAAAAGCAGCTCAATACGTTCGTCAAAACCCAGGTGAAGTTTGCCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40090___ah    451 AAAGTAAAAGCAGCTCAATACGTTCGTCAAAACCCAGGTGAAGTTTGCCC    500

BSNT_06146___    501 GGCTAAATGGGAAGAAGGCGGCGAAACTCTTACACCTAGCCTTGATCTAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40090___ah    501 GGCTAAATGGGAAGAAGGCGGCGAAACTCTTACACCTAGCCTTGATCTAG    550

BSNT_06146___    551 TAGGTAAAATCTAA    564
                     ||||||||||||||
BSU40090___ah    551 TAGGTAAAATCTAA    564


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