Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06139 and BSU40030

See Amino acid alignment / Visit BSNT_06139 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:43
# Commandline: needle
#    -asequence dna-align/BSNT_06139___yxaB.1.22522.seq
#    -bsequence dna-align/BSU40030___yxaB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06139___yxaB-BSU40030___yxaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06139___yxaB-BSU40030___yxaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06139___yxaB
# 2: BSU40030___yxaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1032
# Identity:    1024/1032 (99.2%)
# Similarity:  1024/1032 (99.2%)
# Gaps:           0/1032 ( 0.0%)
# Score: 5088.0
# 
#
#=======================================

BSNT_06139___      1 ATGACTGTACAAGAAATCAAAGGCAAAAAACTAGTAAAAGGCATTGCGCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx      1 ATGACTGTACAAGAAATCAAAGGCAAAAAACTAGTAAAAGGCATTGCGCC     50

BSNT_06139___     51 AAATGTGGAGCCGGAAGCTCTGTTAAATGATAAACGAAAAGTATTTTTGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx     51 AAATGTGGAGCCGGAAGCTCTGTTAAATGATAAACGAAAAGTATTTTTGT    100

BSNT_06139___    101 TTGGTTCCCCTAGTTACACAAACATTGGAGACCAAGCGATTGCGTATGCG    150
                     |||||||||||||.||||||||||||||.|||||||||||||||||||||
BSU40030___yx    101 TTGGTTCCCCTAGCTACACAAACATTGGCGACCAAGCGATTGCGTATGCG    150

BSNT_06139___    151 GAAGAGAAATTTATCAAAAATCATTTTCCGTATTATGAATACATTGAGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    151 GAAGAGAAATTTATCAAAAATCATTTTCCGTATTATGAATACATTGAGAT    200

BSNT_06139___    201 TATGGATTATGCGACGGATGAGGGCATTGAACTGGTGAAGGAGATCATTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    201 TATGGATTATGCGACGGATGAGGGCATTGAACTGGTGAAGGAGATCATTC    250

BSNT_06139___    251 GTGAAGACGATATTGTCTGCTTTACAGGCGGAGGGAACTTAGGAAACCTT    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU40030___yx    251 GTGAAGACGATATTGTCTGCTTTACAGGCGGAGGGAATTTAGGAAACCTT    300

BSNT_06139___    301 TATCTTGATATTGAGGAAGACAGAAGAAAGGTCTTTTCGGCGTTTAAAGA    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    301 TATCTCGATATTGAGGAAGACAGAAGAAAGGTCTTTTCGGCGTTTAAAGA    350

BSNT_06139___    351 CTACAAATCAATTTCTCTGCCACAATCCGTTTATTTTGAGGATACAGAGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    351 CTACAAATCAATTTCTCTGCCACAATCCGTTTATTTTGAGGATACAGAGG    400

BSNT_06139___    401 AAGGACAGAAGGAAAAGAAAAAAACACAGGATGCGTACCATCAAAATACA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    401 AAGGACAGAAGGAAAAGAAAAAAACACAGGATGCGTACCATCAAAATACA    450

BSNT_06139___    451 AACTTAACGATTGCTGCGCGTGAGACGCAAACACTGGATGTTGTGAAAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    451 AACTTAACGATTGCTGCGCGTGAGACGCAAACACTGGATGTTGTGAAAGA    500

BSNT_06139___    501 GACCTTCAACTCCAATGTGATCTTTACACCGGACATGGTGCTTTCCTTGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    501 GACCTTCAACTCCAATGTGATCTTTACACCGGACATGGTGCTTTCCTTGG    550

BSNT_06139___    551 ATATTGTGCCGCGAGAGCTCGAGCGGGACGGCGTTCTCTTTATTTTAAGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    551 ATATTGTGCCGCGAGAGCTCGAGCGGGACGGCGTTCTCTTTATTTTAAGA    600

BSNT_06139___    601 GCGGATAAGGAGAAAGTGACTGACGAAGATTTTATTTCACAGATGAAGAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU40030___yx    601 GCGGATAAGGAGAAAGTGACTGACGAAGATTTTATTTCACAGATGAAGCA    650

BSNT_06139___    651 ATGGGCAGAAAAAACAACTTACACAGAGCGTACCGATACGGTGCTGGATA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    651 ATGGGCAGAAAAAACAACTTACACAGAGCGTACCGATACGGTGCTGGATA    700

BSNT_06139___    701 CGGTCGACACCATCGATTACGCTGATCGTGAAAAGCATTTTATGGAGATG    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    701 CGGTAGACACCATCGATTACGCTGATCGTGAAAAGCATTTTATGGAGATG    750

BSNT_06139___    751 CTGGACCGCATCGGCTCCAGTAAATTGGTGATTACCGACCGCCTTCACGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    751 CTGGACCGCATCGGCTCCAGTAAATTGGTGATTACCGACCGCCTTCACGC    800

BSNT_06139___    801 GATGATTTTCTCGATTATCACCAAAACACCTTGCCTTGTCTTTGGAAACA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    801 GATGATTTTCTCGATTATCACCAAAACACCTTGCCTTGTCTTTGGAAACA    850

BSNT_06139___    851 GCTATGGCAAAGCCAAACATTCATACCGGGATTGGCTTGAAAGCTTAAAC    900
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU40030___yx    851 GCTATGGCAAAGCCAAACATTCATATCGGGATTGGCTTGAAAGCTTAAAC    900

BSNT_06139___    901 TTCATTGAATATACGGATAAGAATGATGTTGAGGAGCTGGAGCGTATGAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    901 TTCATTGAATATACGGATAAGAATGATGTTGAGGAGCTGGAGCGTATGAT    950

BSNT_06139___    951 TGACCGCCTGCTTCAAGCAGAACCGAATGACGTTGATTTATCTAAGGACT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40030___yx    951 TGACCGCCTGCTTCAAGCAGAACCGAATGACGTTGATTTATCTAAGGACT   1000

BSNT_06139___   1001 TTCAGCCGCTGATTGATTTTTTTGCTTCTTAA   1032
                     ||||||||.|||||||||||||||||||||||
BSU40030___yx   1001 TTCAGCCGTTGATTGATTTTTTTGCTTCTTAA   1032


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_06139 and BSU40030

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
