Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06116 and BSU39830

See Amino acid alignment / Visit BSNT_06116 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:41
# Commandline: needle
#    -asequence dna-align/BSNT_06116___yxcA.1.22522.seq
#    -bsequence dna-align/BSU39830___yxcA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06116___yxcA-BSU39830___yxcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06116___yxcA-BSU39830___yxcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06116___yxcA
# 2: BSU39830___yxcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     242/252 (96.0%)
# Similarity:   242/252 (96.0%)
# Gaps:           0/252 ( 0.0%)
# Score: 1170.0
# 
#
#=======================================

BSNT_06116___      1 TTGAAAGTACAGCATAAGAAGGAGCTCAAGTTTTATTGCTTTATCACGAT     50
                     |||||.|||||||||||||||||||||||||||||||||.|..|.||.||
BSU39830___yx      1 TTGAAGGTACAGCATAAGAAGGAGCTCAAGTTTTATTGCATCGTGACCAT     50

BSNT_06116___     51 TCCATCGGCGTTTGTTGTGCTGACTGTCATCTCTTTTTTATTGCAAGAGA    100
                     ||||||.||.||||||||||||||||||||||||||||||||||||||||
BSU39830___yx     51 TCCATCTGCATTTGTTGTGCTGACTGTCATCTCTTTTTTATTGCAAGAGA    100

BSNT_06116___    101 TTACGTTTCCGGTGACTGCAAGCGCATTTCTGAATGCTTCATGGCATAAT    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU39830___yx    101 TTACGTTCCCGGTGACTGCAAGCGCATTTCTGAATGCTTCATGGCATAAT    150

BSNT_06116___    151 CTTTTGTTTTTGATACCGTTCGGTTTGTTTTTCTACCCGGTGCATATATG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39830___yx    151 CTTTTGTTTTTGATACCGTTCGGTTTGTTTTTCTACCCGGTGCATATATG    200

BSNT_06116___    201 GATGAAGCGGGAGTTTGGCCGCTGGAATGACACAGAAAAAAAGAGAGGAT    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU39830___yx    201 GATGAAGCGGGAGTTTGGCCGTTGGAATGACACAGAAAAAAAGAGAGGAT    250

BSNT_06116___    251 GA    252
                     ||
BSU39830___yx    251 GA    252


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