Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06103 and BSU39770

See Amino acid alignment / Visit BSNT_06103 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:40
# Commandline: needle
#    -asequence dna-align/BSNT_06103___iolR.1.22522.seq
#    -bsequence dna-align/BSU39770___iolR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06103___iolR-BSU39770___iolR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06103___iolR-BSU39770___iolR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06103___iolR
# 2: BSU39770___iolR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 756
# Identity:     753/756 (99.6%)
# Similarity:   753/756 (99.6%)
# Gaps:           0/756 ( 0.0%)
# Score: 3753.0
# 
#
#=======================================

BSNT_06103___      1 ATGAAACTGATGCGGATTCAGGAAATGGAGGAGTACATTTTATCGCATGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io      1 ATGAAACTGATGCGGATTCAGGAAATGGAGGAGTACATTTTATCGCATGG     50

BSNT_06103___     51 CACTGTTTCCTTAGATGAGCTGTGCCAGGTGTTCAATGTCTCCAAAAACA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io     51 CACTGTTTCCTTAGATGAGCTGTGCCAGGTGTTCAATGTCTCCAAAAACA    100

BSNT_06103___    101 CAGTCAGACGTGATATCAACAAGCTAACAGAAAAGGGTGCGATTGAAAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    101 CAGTCAGACGTGATATCAACAAGCTAACAGAAAAGGGTGCGATTGAAAAA    150

BSNT_06103___    151 GTATACGGCGGCGTAACATCTATTGAAAAAACCGCATTAGTTCCTTTTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    151 GTATACGGCGGCGTAACATCTATTGAAAAAACCGCATTAGTTCCTTTTGA    200

BSNT_06103___    201 AAATCGCACCATTCAGCACCAGGATGAAAAAACAAAAATCGCCCATTATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    201 AAATCGCACCATTCAGCACCAGGATGAAAAAACAAAAATCGCCCATTATG    250

BSNT_06103___    251 CTTCCCGATTTATTGAAGATCACGATTTGGTCTTCATTGATTCAGGAACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    251 CTTCCCGATTTATTGAAGATCACGATTTGGTCTTCATTGATTCAGGAACG    300

BSNT_06103___    301 ACGACAAAGTCTATTCTTGATACGCTTGATCCAGCCAAAAATGTCACCAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    301 ACGACAAAGTCTATTCTTGATACGCTTGATCCAGCCAAAAATGTCACCAT    350

BSNT_06103___    351 CTTAACCAACAGTTTAGACATTATCAATGCGGCGTCAGCATTGAAGAATA    400
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU39770___io    351 CTTAACCAACAGTTTAGACATTATCAATGCGGCGTCAGCTTTGAAGAATA    400

BSNT_06103___    401 TCAACTTAATCATTATCGGAAACAACTATAAGAGAAAAACCCGCTCCTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    401 TCAACTTAATCATTATCGGAAACAACTATAAGAGAAAAACCCGCTCCTTT    450

BSNT_06103___    451 GTCGGCATGGACGACCCGGCTATGCTTGATAAGTACAATATCAACAAAGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    451 GTCGGCATGGACGACCCGGCTATGCTTGATAAGTACAATATCAACAAAGC    500

BSNT_06103___    501 CTTTATGTCCGCTACCGGAACGACGCTGACACACGGATTGACCAATTCGG    550
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU39770___io    501 CTTTATGTCCGCTACCGGAACGACGCTGACTCACGGATTGACCAATTCGG    550

BSNT_06103___    551 ATCTGCTGGAGTATGAAATTAAAAAGAGGATTTCAGAAAAAGCAAAAGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    551 ATCTGCTGGAGTATGAAATTAAAAAGAGGATTTCAGAAAAAGCAAAAGAA    600

BSNT_06103___    601 GTGTATCTATTGGCTGACCATTCTAAATTCGGAAAATCAACGCTTCTGAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    601 GTGTATCTATTGGCTGACCATTCTAAATTCGGAAAATCAACGCTTCTGAC    650

BSNT_06103___    651 GTATGCGCCGTTTGACAGGCTGCATTGCATTGTGACCTCTCAGCCATTAG    700
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    651 GTATGCACCGTTTGACAGGCTGCATTGCATTGTGACCTCTCAGCCATTAG    700

BSNT_06103___    701 ACGACGAGTACACGCAGTACTGCAATGAGCATCAAATCGGCATTCATCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39770___io    701 ACGACGAGTACACGCAGTACTGCAATGAGCATCAAATCGGCATTCATCTG    750

BSNT_06103___    751 GCCTAA    756
                     ||||||
BSU39770___io    751 GCCTAA    756


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