Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_06099 and BSU39750

See Amino acid alignment / Visit BSNT_06099 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:40
# Commandline: needle
#    -asequence dna-align/BSNT_06099___iolB.1.22522.seq
#    -bsequence dna-align/BSU39750___iolB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06099___iolB-BSU39750___iolB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06099___iolB-BSU39750___iolB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06099___iolB
# 2: BSU39750___iolB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity:     808/816 (99.0%)
# Similarity:   808/816 (99.0%)
# Gaps:           0/816 ( 0.0%)
# Score: 4008.0
# 
#
#=======================================

BSNT_06099___      1 ATGAGTTATTTGTTGCGTAAGCCGCAGTCGCATGAAGTGTCTAATGGGGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39750___io      1 ATGAGTTATTTGTTGCGTAAGCCGCAGTCGCATGAAGTGTCTAATGGGGT     50

BSNT_06099___     51 CAAACTCGTGCACGAAGTAACGACATCCAACTCTGATCTCACTTATGTAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39750___io     51 CAAACTCGTGCACGAAGTAACGACATCCAACTCTGATCTCACTTATGTAG    100

BSNT_06099___    101 AGTTTAAAGTGTTAGATCTTGCATCAGGTTCAAGCTATACAGAAGAATTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39750___io    101 AGTTTAAAGTGTTAGATCTTGCATCAGGTTCAAGCTATACAGAAGAATTG    150

BSNT_06099___    151 AAAAAACAAGAAATCTGTATTGTGGCGGTAACGGGAAAAATTACAGTGAC    200
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU39750___io    151 AAAAAACAAGAAATCTGTATTGTGGCGGTAACGGGGAAAATTACAGTGAC    200

BSNT_06099___    201 AGATCATGAGTCGACTTTTGAGAATATCGGCACGCGTGAAAGCGTATTTG    250
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU39750___io    201 AGATCATGAGTCGACTTTTGAGAATATCGGCACGCGCGAAAGCGTATTTG    250

BSNT_06099___    251 AACGAAAACCGACAGACAGCGTCTATATATCAAATGACCGTGCATTTGAG    300
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU39750___io    251 AACGAAAACCGACAGACAGCGTCTATATTTCAAATGACCGTGCATTTGAG    300

BSNT_06099___    301 ATCACAGCAGTCAGCGACGCAAGAGTGGCGCTTTGCTATTCTCCATCGGA    350
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU39750___io    301 ATCACAGCGGTCAGCGACGCAAGAGTGGCGCTTTGCTATTCTCCATCGGA    350

BSNT_06099___    351 AAAGCAGCTTCCGACAAAGCTGATCAAAGCGGAAGACAACGGAATTGAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39750___io    351 AAAGCAGCTTCCGACAAAGCTGATCAAAGCGGAAGACAACGGAATTGAGC    400

BSNT_06099___    401 ATCGCGGGCAATTTTCAAACAAACGTACTGTTCATAACATTCTTCCGGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39750___io    401 ATCGCGGGCAATTTTCAAACAAACGTACTGTTCATAACATTCTTCCGGAT    450

BSNT_06099___    451 TCAGACCCTTCAGCTAACAGTCTATTAGTAGTTGAAGTCTATACAGACAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39750___io    451 TCAGACCCTTCAGCTAACAGTCTATTAGTAGTTGAAGTCTATACAGACAG    500

BSNT_06099___    501 CGGCAACTGGTCCAGCTACCCGCCTCACAAACATGATCAAGACAACTTGC    550
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU39750___io    501 CGGCAACTGGTCCAGCTACCCGCCTCACAAACATGACCAAGACAACTTGC    550

BSNT_06099___    551 CGGAAGAATCTTTCTTAGAAGAAACGTACTACCATGAGTTAGACCCGGGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39750___io    551 CGGAAGAATCTTTCTTAGAAGAAACGTACTACCATGAGTTAGACCCGGGA    600

BSNT_06099___    601 CAGGGCTTTGTATTTCAGCGCGTATACACAGATGACCGTTCTATTGACGA    650
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU39750___io    601 CAGGGCTTTGTGTTTCAGCGCGTATACACAGATGACCGTTCTATTGACGA    650

BSNT_06099___    651 GACAATGACTGTGGAAAATGAAAACGTTGTCATCGTTCCTGCGGGATACC    700
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU39750___io    651 GACAATGACTGTGGGAAATGAAAACGTTGTCATCGTTCCTGCGGGATACC    700

BSNT_06099___    701 ACCCGGTAGGCGTTCCGGACGGATACACATCCTACTATTTAAATGTCATG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39750___io    701 ACCCGGTAGGCGTTCCGGACGGATACACATCCTACTATTTAAATGTCATG    750

BSNT_06099___    751 GCAGGGCCGACGCGAAAATGGAAGTTTTATAACGACCCGGCGCATGAGTG    800
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU39750___io    751 GCAGGGCCGACGCGAAAATGGAAGTTTTATAACGACCCGGCGCATGAATG    800

BSNT_06099___    801 GATTTTAGAACGCTAA    816
                     ||||||||||||||||
BSU39750___io    801 GATTTTAGAACGCTAA    816


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.