Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06065 and BSU39550

See Amino acid alignment / Visit BSNT_06065 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:36
# Commandline: needle
#    -asequence dna-align/BSNT_06065___yxeH.1.22522.seq
#    -bsequence dna-align/BSU39550___yxeH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06065___yxeH-BSU39550___yxeH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06065___yxeH-BSU39550___yxeH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06065___yxeH
# 2: BSU39550___yxeH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 813
# Identity:     805/813 (99.0%)
# Similarity:   805/813 (99.0%)
# Gaps:           0/813 ( 0.0%)
# Score: 3993.0
# 
#
#=======================================

BSNT_06065___      1 ATGTACAAACTAATTGCAATTGATATGGATGGAACACTTTTAAATGATCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx      1 ATGTACAAACTAATTGCAATTGATATGGATGGAACACTTTTAAATGATCA     50

BSNT_06065___     51 TCATGAAGTAACAGAGGAGGTCCGCGACGCCCTTCACGCGGCAAAAGCGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx     51 TCATGAAGTAACAGAGGAGGTCCGCGACGCCCTTCACGCGGCAAAAGCGG    100

BSNT_06065___    101 AAGGTGTCAAAATTGTGCTTTGCACCGGCCGGCCTATCGGGGGTGTGCAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    101 AAGGTGTCAAAATTGTGCTTTGCACCGGCCGGCCTATCGGGGGTGTGCAG    150

BSNT_06065___    151 AGATATTTAGATGAACTGAATTTAATTGAAGAAGGCGACTATGTTATTGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    151 AGATATTTAGATGAACTGAATTTAATTGAAGAAGGCGACTATGTTATTGC    200

BSNT_06065___    201 GTATAATGGAGCGCTTGTTCAAAATACGCATACAAATGAAGTGGTCTCAG    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU39550___yx    201 GTATAATGGAGCACTTGTTCAAAATACGCATACAAATGAAGTGGTCTCAG    250

BSNT_06065___    251 AGCTGTCTCTCGGTTATGATGATTTGACTTCATTATATGACCTGAGCTTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    251 AGCTGTCTCTCGGTTATGATGATTTGACTTCATTATATGACCTGAGCTTA    300

BSNT_06065___    301 GAGCTGAAGACGCCGATGCATTTCTTTGACTCATCTAATTTGTATACGCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    301 GAGCTGAAGACGCCGATGCATTTCTTTGACTCATCTAATTTGTATACGCC    350

BSNT_06065___    351 TAACCGGGACATTAGCGAATTTACCGTATACGAATCCTATGTGACACAGG    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    351 TAACCGGGATATTAGCGAATTTACCGTATACGAATCCTATGTGACACAGG    400

BSNT_06065___    401 TGCCGCTTCATTTCCGCAAAATTGACGAGGTGCCAAAAGATATCCTCATC    450
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU39550___yx    401 TGCCGCTTCATTTCCGCAAGATTGACGAGGTGCCAAAAGATATCCTCATC    450

BSNT_06065___    451 CCGAAAGTGATGTTTATTGATAAACCGGAGAACTTAAGCCGCGTCATTAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    451 CCGAAAGTGATGTTTATTGATAAACCGGAGAACTTAAGCCGCGTCATTAC    500

BSNT_06065___    501 ATCGATTCCGAAAGACGTGAGAGAAAAATATACAATGGTCAGAAGCGCGC    550
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    501 ATCGATTCCAAAAGACGTGAGAGAAAAATATACAATGGTCAGAAGCGCGC    550

BSNT_06065___    551 CTTTCTTTTATGAAATTCTGCACTCGGAAGCCAGCAAAGGAAATGCTGTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    551 CTTTCTTTTATGAAATTCTGCACTCGGAAGCCAGCAAAGGAAATGCTGTA    600

BSNT_06065___    601 CGCCAGCTGGCTCAGCTCCTTGGAATTGAACAGACGGAAGTCATGTGCAT    650
                     |||||||||||||||||.|||||||||||||||.||||||||||||||||
BSU39550___yx    601 CGCCAGCTGGCTCAGCTGCTTGGAATTGAACAGGCGGAAGTCATGTGCAT    650

BSNT_06065___    651 AGGCGACAACGGGAACGACCTGACAATGATCGAATGGGCGGGCTGCGGGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    651 AGGCGACAACGGGAACGACCTGACAATGATCGAATGGGCGGGCTGCGGGG    700

BSNT_06065___    701 TTGCCATGGCAAACGCCATCCCAGAAGTATTGGAAGCAGCAAACTTTCAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39550___yx    701 TTGCCATGGCAAACGCCATCCCAGAAGTATTGGAAGCAGCAAACTTTCAA    750

BSNT_06065___    751 ACACGCTCCAATAATGAACATGGTGTTGCGCATGCGATTCACGAGCTTGT    800
                     |||||||||||||||||||||||.|||||.||||||||||||||||||||
BSU39550___yx    751 ACACGCTCCAATAATGAACATGGCGTTGCACATGCGATTCACGAGCTTGT    800

BSNT_06065___    801 TTTGGCTAAATAA    813
                     |||||||||||||
BSU39550___yx    801 TTTGGCTAAATAA    813


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