Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06041 and BSU39390

See Amino acid alignment / Visit BSNT_06041 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence dna-align/BSNT_06041.1.22522.seq
#    -bsequence dna-align/BSU39390___hutM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06041-BSU39390___hutM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06041-BSU39390___hutM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06041
# 2: BSU39390___hutM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1428
# Identity:     883/1428 (61.8%)
# Similarity:   883/1428 (61.8%)
# Gaps:         525/1428 (36.8%)
# Score: 4335.0
# 
#
#=======================================

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu      1 GTGAATCTTCAGGAGAACAGCAGCCAACAGCTAAAACGCACAATGAAAAG     50

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu     51 CAGGCACCTATTTATGATCTCATTGGGAGGCGTCATAGGCACAGGACTTT    100

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu    101 TCCTCAGTACGGGCTATACGCTACATCAAGCCGGACCCGGCGGTACGATA    150

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu    151 CTCGCTTATGTAATCGGCGGGTTGATGATGTACCTCGTCATGCAATGTCT    200

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu    201 CGGCGAATTGTCGGTTGCCATGCCGGTGACCGGCTCTTTTCAAAAATATG    250

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu    251 CTACAACATTTATCGGTCCATCTACCGGTTTTATGGTCGGCATCATGTAC    300

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu    301 TGGATCAATTGGGTGGTGACGGTAGGCTCTGAGTTTACCGCATCCGGTAT    350

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu    351 TCTCATGCAGCGCTGGTTCCCTGACAGCAGTGTATGGATGTGGAGTGCGA    400

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu    401 TTTTTGCAGCCCTTCTTTTTATATGCAACGCATTTTCAGTTAAGTTATTT    450

BSNT_06041         0 --------------------------------------------------      0
                                                                       
BSU39390___hu    451 GCGGAAACTGAATTTTGGTTTTCCAGCGTAAAGATTGTCACCATTATTTT    500

BSNT_06041         1 -------------------------ATGTTTGGCCTGATCTCTTTAAACG     25
                                              |||||||||||||||||||||||||
BSU39390___hu    501 ATTTATCATTTTAGGAGGAGCCGCCATGTTTGGCCTGATCTCTTTAAACG    550

BSNT_06041        26 GAACGGCGGATGCTCCTATGCTGTCAAACTTCACGGACCACGGCGGGCTG     75
                     ||||||||||||||||||||.|||||||||||||.||.||.||||||.||
BSU39390___hu    551 GAACGGCGGATGCTCCTATGTTGTCAAACTTCACAGATCATGGCGGGTTG    600

BSNT_06041        76 TTTCCGAATGGCTTTCTCGCCGTTTTTATCGCGATGATATCTGTGAGTTT    125
                     |||||.|||||||||||||||||||||||||||||||||||||||||.||
BSU39390___hu    601 TTTCCAAATGGCTTTCTCGCCGTTTTTATCGCGATGATATCTGTGAGCTT    650

BSNT_06041       126 CGCCTTTTCTGGTACAGAGTTAATCGGCGTTACAGCAGGAGAATCAGCAA    175
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU39390___hu    651 CGCCTTTTCCGGTACAGAGTTAATCGGCGTTACAGCAGGAGAATCAGCAA    700

BSNT_06041       176 ATCCTCAAAAGGATATACCGCGATCCATCCGTAATGTCGCATGGAGAACC    225
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39390___hu    701 ATCCTCAAAAGGATATACCGCGATCCATCCGTAATGTCGCATGGAGAACC    750

BSNT_06041       226 GTTATTTTTTTCATTGGCGCTGTCTTCATATTATCCGGGTTGATTTCGTG    275
                     ||.||||||||||||||||||||||||||||||||||||||||||||.||
BSU39390___hu    751 GTGATTTTTTTCATTGGCGCTGTCTTCATATTATCCGGGTTGATTTCATG    800

BSNT_06041       276 GAAGGACGCAGGCGTGATTGAAAGCCCGTTTGTAGCCGTATTTGCGGAGA    325
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU39390___hu    801 GAAGGACGCAGGCGTGATTGAAAGCCCGTTTGTCGCCGTATTTGCGGAGA    850

BSNT_06041       326 TCGGAATCCCTTACGCTGCTGATATTATGAATTTCGTGATATTAACAGCC    375
                     |||||||.|||||||||||||||||||||||||||||.||||||||||||
BSU39390___hu    851 TCGGAATTCCTTACGCTGCTGATATTATGAATTTCGTAATATTAACAGCC    900

BSNT_06041       376 TTGCTGTCTGTCGCCAACTCAGGCTTATATGCTTCGACCCGTATGATGTG    425
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39390___hu    901 TTGCTGTCTGTCGCCAACTCAGGCTTATATGCTTCGACCCGTATGATGTG    950

BSNT_06041       426 GTCGTTAGCAAATGAAAACATGATCAGTTCCCGTTTTAAGAAAGTGACCT    475
                     |||.|||||||||||||||||||||||.||||||||||||||||||||.|
BSU39390___hu    951 GTCTTTAGCAAATGAAAACATGATCAGCTCCCGTTTTAAGAAAGTGACAT   1000

BSNT_06041       476 CTAAAGGCATTCCTTTAAATGCCTTAATGATCAGTATGGCTGTATCTTGT    525
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39390___hu   1001 CTAAAGGCATTCCTTTAAATGCCTTAATGATCAGTATGGCTGTATCTTGT   1050

BSNT_06041       526 TTATCTCTCGTTTCCAGTATCGTGGCCCCTGGAACTGTCTATGTGGTGAT    575
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39390___hu   1051 TTATCTCTCGTTTCCAGTATCGTGGCCCCTGGAACTGTCTATGTGGTGAT   1100

BSNT_06041       576 GGTCGCAATTGCTGGATTTGCAGGAGTCGTGGTCTGGATGAGCATTGCCT    625
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39390___hu   1101 GGTCGCAATTGCTGGATTTGCAGGAGTCGTGGTCTGGATGAGCATTGCCT   1150

BSNT_06041       626 TGTCCCAGCTCTTGTTTCGAAAGAGATTTCTGAAAAAAGGGGGGAATGTA    675
                     |||||||.|||||||||||||||||||||.||||||||||||||.|||||
BSU39390___hu   1151 TGTCCCAACTCTTGTTTCGAAAGAGATTTTTGAAAAAAGGGGGGGATGTA   1200

BSNT_06041       676 AAAGATCTGACATTTCGCACGCCGCTTTATCCTCTTATGCCTATAGCCGC    725
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39390___hu   1201 AAAGATCTGACATTTCGCACGCCGCTTTATCCTCTTATGCCTATAGCCGC   1250

BSNT_06041       726 TCTCTTATTATGTTCTGCTTCTTGTATCGGTCTTGCTTTTGATCCCAATC    775
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39390___hu   1251 TCTCTTATTATGTTCTGCTTCTTGTATCGGTCTTGCTTTTGATCCCAATC   1300

BSNT_06041       776 AAAGAATCGCACTTTTCTGCGGAGTTCCTTGTATCATCCTTTGCTATCTC    825
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39390___hu   1301 AAAGAATCGCACTTTTCTGCGGAGTTCCTTGTATCATCCTTTGCTATCTC   1350

BSNT_06041       826 ATCTACCATTTCAAAAGAAATGTTACAAAAGCGAAAAAAATCAGCCAAGA    875
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39390___hu   1351 ATCTACCATTTCAAAAGAAATGTTACAAAAGCGAAAAAAATCAGCCAAGA   1400

BSNT_06041       876 GGAATATCCGGCCGATCACATCCTATAA    903
                     |||||||||.||||||||||||||||||
BSU39390___hu   1401 GGAATATCCAGCCGATCACATCCTATAA   1428


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