Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06010 and BSU39210

See Amino acid alignment / Visit BSNT_06010 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence dna-align/BSNT_06010___yxiF.1.22522.seq
#    -bsequence dna-align/BSU39210___yxiF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06010___yxiF-BSU39210___yxiF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06010___yxiF-BSU39210___yxiF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06010___yxiF
# 2: BSU39210___yxiF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity:     443/480 (92.3%)
# Similarity:   443/480 (92.3%)
# Gaps:           9/480 ( 1.9%)
# Score: 2103.0
# 
#
#=======================================

BSNT_06010___      1 ATGCAGCTCATGCAAAAAAGATTAATCGAAAAACTCGCCGAGAATAAAAG     50
                              ||||||||||||||.||||||||||||||||||||||||||
BSU39210___yx      1 ---------ATGCAAAAAAGATTGATCGAAAAACTCGCCGAGAATAAAAG     41

BSNT_06010___     51 ACATATGTTGATGAGCGAAATCAAAAAAAAATTAGTTCCTTGTGTAGAAA    100
                     ||.|.|.||||||||||||||||||.|||||.||||.|||||||.|||||
BSU39210___yx     42 ACGTTTATTGATGAGCGAAATCAAAGAAAAACTAGTCCCTTGTGCAGAAA     91

BSNT_06010___    101 GAGGCTTCACTTATCGTTTTGCTGATCTGGCGCAAAGCAAGCAATTGCTT    150
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU39210___yx     92 GAGGCTTCACTTATCGTTTTGCTGATCTGGCGCAAAGCAGGCAATTGCTT    141

BSNT_06010___    151 GAGCTGGTTTTATCAAATTCAATACCAGCCAACACCCGTGAGGTTGATGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39210___yx    142 GAGCTGGTTTTATCAAATTCAATACCAGCCAACACCCGTGAGGTTGATGC    191

BSNT_06010___    201 CCTCGAAAAAACGGAAGCGAAACAGTTGATCTGGAAAATATCTCAGTCAT    250
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU39210___yx    192 CCTCGAAAAAACGGAAGCGAAACAGCTGATCTGGAAAATATCTCAGTCAT    241

BSNT_06010___    251 ATGTTGCTTATGATGACCGGGACGTTCTGCTGTTTCATCAATACAGCAGC    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU39210___yx    242 ATGTTGCTTACGATGACCGGGACGTTCTGCTGTTTCATCAATACAGCAGC    291

BSNT_06010___    301 GAAATTGGTGCGTTAATTTCTTCTTTTGGAAAATGTCTCGAGCACCTTGA    350
                     |||||||||||||||.|||.||||||||||||||||||||||||||||||
BSU39210___yx    292 GAAATTGGTGCGTTAGTTTGTTCTTTTGGAAAATGTCTCGAGCACCTTGA    341

BSNT_06010___    351 CGGCATATTCGAATGTATTGGGTTCGACAAAGGGCTTCTCAATCATAGTT    400
                     |.||.||||.||.|||||||.||||||..|||||.|||||||||||||||
BSU39210___yx    342 CTGCTTATTGGAGTGTATTGAGTTCGATGAAGGGATTCTCAATCATAGTT    391

BSNT_06010___    401 TTATTTTGGTTGAGCCTAAGGGTCAGTTTGGATTATGTATATTGCACACG    450
                     ||||||||||||||||||||.|.||||||||.||||||||||||||||||
BSU39210___yx    392 TTATTTTGGTTGAGCCTAAGTGCCAGTTTGGTTTATGTATATTGCACACG    441

BSNT_06010___    451 GAATATGGCTGTGAGGTTGTATATTGGTAG    480
                     |||||.||.||||||.||||.|||||||||
BSU39210___yx    442 GAATACGGATGTGAGCTTGTTTATTGGTAG    471


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