Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05992 and BSU39150

See Amino acid alignment / Visit BSNT_05992 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence dna-align/BSNT_05992___yxiJ.1.22522.seq
#    -bsequence dna-align/BSU39150___yxiJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05992___yxiJ-BSU39150___yxiJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05992___yxiJ-BSU39150___yxiJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05992___yxiJ
# 2: BSU39150___yxiJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     280/297 (94.3%)
# Similarity:   280/297 (94.3%)
# Gaps:           0/297 ( 0.0%)
# Score: 1332.0
# 
#
#=======================================

BSNT_05992___      1 GTGTTTGAACAGCTGAGAAAAAGACAGCGAGAGCTTGAAGAAAAGCCGTA     50
                     |||.||.||.|.||||||||||||||||||||||||||||||||||.|||
BSU39150___yx      1 GTGCTTCAAAAACTGAGAAAAAGACAGCGAGAGCTTGAAGAAAAGCAGTA     50

BSNT_05992___     51 TCCTAGTGAATTGTACGGCTTTGAAACGGAAATCTATGAGTTTTTTATGC    100
                     .|||..|||||||||||||||||||.||||||||||||||||||||||||
BSU39150___yx     51 CCCTGATGAATTGTACGGCTTTGAAGCGGAAATCTATGAGTTTTTTATGC    100

BSNT_05992___    101 TAGTTGATGGCAGTTTGGATTACGTGCTGGCGAATAAAAGGATGCCCCAG    150
                     |.||||.|||||||||||||||.||||||||||||||||||||.||||.|
BSU39150___yx    101 TTGTTGCTGGCAGTTTGGATTATGTGCTGGCGAATAAAAGGATACCCCGG    150

BSNT_05992___    151 CATCAGCGGCGTTCGTTGGAGAAAAGCTTTTTTGAGCTTTATCCTGACAT    200
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU39150___yx    151 CATCAGCGGCGTTCGTTGGAGAAAAGCTTTTTTGAGCTGTATCCTGACAT    200

BSNT_05992___    201 ACTTCCGGATATGATCAAAAACGATAAAGATCTGTATCAGCACATTCTCT    250
                     |||||||||||||||||||||||||||.|||||||||||.||||||||||
BSU39150___yx    201 ACTTCCGGATATGATCAAAAACGATAAGGATCTGTATCATCACATTCTCT    250

BSNT_05992___    251 TGTATGAACAAGTCAGACAAGAGATTTGCGTTGCGCTATCCAACTGA    297
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU39150___yx    251 TGTATGAACAAGTCAGACAAGAGATTTGCGTTGCGCTATCCAACTGA    297


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