Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05989 and BSU39120

See Amino acid alignment / Visit BSNT_05989 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence dna-align/BSNT_05989___yxiM.1.22522.seq
#    -bsequence dna-align/BSU39120___yxiM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05989___yxiM-BSU39120___yxiM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05989___yxiM-BSU39120___yxiM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05989___yxiM
# 2: BSU39120___yxiM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1149
# Identity:    1113/1149 (96.9%)
# Similarity:  1113/1149 (96.9%)
# Gaps:           0/1149 ( 0.0%)
# Score: 5421.0
# 
#
#=======================================

BSNT_05989___      1 ATGAAAAAATGGATGGCAGCGGTTTTTGTGATGATGCTGATGCTGTGTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39120___yx      1 ATGAAAAAATGGATGGCAGCGGTTTTTGTGATGATGCTGATGCTGTGTTT     50

BSNT_05989___     51 TGGCGGGATTGAGAATGTGAAGGCGGCGGAGCCGAAGGTGTATCAGTTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39120___yx     51 TGGCGGGATTGAGAATGTGAAGGCGGCGGAGCCGAAGGTGTATCAGTTTG    100

BSNT_05989___    101 ACTTTGGAAGCGGTTCGATGGAGCCTGGTTATATTGGTGTCAGGGCGTCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39120___yx    101 ACTTTGGAAGCGGTTCGATGGAGCCTGGTTATATTGGTGTCAGGGCGTCT    150

BSNT_05989___    151 GATCGGTATGACCGGTCAAAGGGCTACGGTTTTCAAACACCGGAGAATAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39120___yx    151 GATCGGTATGACCGGTCAAAGGGCTACGGTTTTCAAACACCGGAGAATAT    200

BSNT_05989___    201 GAGGGATGTGGCGGCATCCGGGACTGGTGTGAAGAGTGATGCGGTTCAGT    250
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU39120___yx    201 GAGGGATGTGGCGGCATCCGGGGCTGGTGTGAAGAGTGATGCGGTTCAGT    250

BSNT_05989___    251 TTTTAGCGTATGGGACGAAAAGCAATAACACGTTTAATGTGGATCTCCCG    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU39120___yx    251 TTTTAGCGTATGGGACGAAAAGCAATAACACGTTTAATGTTGATCTCCCG    300

BSNT_05989___    301 AATGGCCTTTATGAGGTGAAGGTGACGCTTGGCAATACGGCAAGGGCCAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39120___yx    301 AATGGCCTTTATGAGGTGAAGGTGACGCTTGGCAATACGGCAAGGGCCAG    350

BSNT_05989___    351 TGTGGCGGCGGAGGGCGTGTTTCAGGTCATTAATATGACAGGGGATGGCG    400
                     ||||||.|||||||||||||||||||||||.|||||||||||||||||||
BSU39120___yx    351 TGTGGCAGCGGAGGGCGTGTTTCAGGTCATCAATATGACAGGGGATGGCG    400

BSNT_05989___    401 CGGAGGATACGTTCCAAATTCCCGTCACCGACGGGCAGCTGAATCTGCTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39120___yx    401 CGGAGGATACGTTCCAAATTCCCGTCACCGACGGGCAGCTGAATCTGCTG    450

BSNT_05989___    451 GTGACAGAGGGGAAAGCTGGCACCGCTTTTACGCTTAGCGCCTTGAAAAT    500
                     |||||||||||.||.||.|||||||||||||||||.||||||||||||||
BSU39120___yx    451 GTGACAGAGGGAAAGGCAGGCACCGCTTTTACGCTCAGCGCCTTGAAAAT    500

BSNT_05989___    501 AAAGAAATTGTCTGATCAGCCGGTGACGAACCGAACCATTTATATCGGAG    550
                     ||||||||||||||||||||||||.|||||.||||||||||||.||||.|
BSU39120___yx    501 AAAGAAATTGTCTGATCAGCCGGTAACGAATCGAACCATTTATGTCGGCG    550

BSNT_05989___    551 GCGACTCGACGGTGTGCAATTATTATCCGCTCAACAGCAGCAAGCAGGCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39120___yx    551 GCGACTCGACGGTGTGCAATTATTATCCGCTCAACAGCAGCAAGCAGGCG    600

BSNT_05989___    601 GGCTGGGGGCAGATGCTGCCTCACTATATCGATAAACACACCTTTCAAGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39120___yx    601 GGCTGGGGGCAGATGCTGCCTCACTATATCGATAAACACACCTTTCAAGT    650

BSNT_05989___    651 GAGAAACATGGCGTCCGGCGGGCAGATCGCGAGAGGATTCAGAAATGATG    700
                     |||||||||||||||.||||||||||||||||||||.|||||||||||||
BSU39120___yx    651 GAGAAACATGGCGTCTGGCGGGCAGATCGCGAGAGGGTTCAGAAATGATG    700

BSNT_05989___    701 GACAGCTTGAGGCGATCCTGAAGTATATTAAACCGGGAGATTATTTTATC    750
                     ||||||||||||||||.|||||||||||||||||.||||||||||||||.
BSU39120___yx    701 GACAGCTTGAGGCGATTCTGAAGTATATTAAACCCGGAGATTATTTTATG    750

BSNT_05989___    751 TTGCAGCTCGGCATTAATGACACAAATCCGAAGCATAATGAATCTGAAGC    800
                     ||||||||.|||||||||||||||||||||||||||||.|||||||||||
BSU39120___yx    751 TTGCAGCTTGGCATTAATGACACAAATCCGAAGCATAAAGAATCTGAAGC    800

BSNT_05989___    801 GGAGTTTAAAGAGATGATGCGTGATATGATCCGCCAGGTGAAAGCGAAAG    850
                     |||||||||||||.||||||||||||||||.||.|||||.||||||||||
BSU39120___yx    801 GGAGTTTAAAGAGGTGATGCGTGATATGATTCGTCAGGTAAAAGCGAAAG    850

BSNT_05989___    851 GAGCGGACGTCATCCTATCAACGCCTCAGGGCCGGGCGACCGATTTTACT    900
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU39120___yx    851 GAGCGGACGTCATCCTATCAACGCCTCAGGGCCGGGCAACCGATTTTACT    900

BSNT_05989___    901 TCTGAGGGCGTCCATTCGTCTGTAAACAGATGGTACAGGGCCTCTATTTT    950
                     |||||.|||.||||||||||||||||||||||||||||||||||||||||
BSU39120___yx    901 TCTGAAGGCATCCATTCGTCTGTAAACAGATGGTACAGGGCCTCTATTTT    950

BSNT_05989___    951 GGCTTTGGCCGAAGAGGAAAAAACACATCTCATTGACTTAAATGTCCTCA   1000
                     .||||||||||||||||||||||||.||||||||||||||||||||||||
BSU39120___yx    951 AGCTTTGGCCGAAGAGGAAAAAACATATCTCATTGACTTAAATGTCCTCA   1000

BSNT_05989___   1001 GCTCGGCATACTTTACATCGATCGGTCCGGAAAAAACACTCGCGCTTTAT   1050
                     |||||||||||||||||||||||||||||||||.||||||||.|||||||
BSU39120___yx   1001 GCTCGGCATACTTTACATCGATCGGTCCGGAAAGAACACTCGGGCTTTAT   1050

BSNT_05989___   1051 ATGGACGGAGATACGCTTCATCCGAACCGCGCTGGGGCCGACGCACTGGC   1100
                     |||||.|||||||||||.||.|||||.|||||.|||||||||||||||||
BSU39120___yx   1051 ATGGATGGAGATACGCTGCACCCGAATCGCGCGGGGGCCGACGCACTGGC   1100

BSNT_05989___   1101 GCGATTGGCTGTTCAGGAGCTAAAACGCCAGGGAATCGATGGCTTTTAA   1149
                     ||||||||||||||||||||||||||||||||||||||.||||||||||
BSU39120___yx   1101 GCGATTGGCTGTTCAGGAGCTAAAACGCCAGGGAATCGCTGGCTTTTAA   1149


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