Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05984 and BSU39090

See Amino acid alignment / Visit BSNT_05984 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence dna-align/BSNT_05984___yxiP.1.22522.seq
#    -bsequence dna-align/BSU39090___yxiP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05984___yxiP-BSU39090___yxiP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05984___yxiP-BSU39090___yxiP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05984___yxiP
# 2: BSU39090___yxiP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 681
# Identity:     672/681 (98.7%)
# Similarity:   672/681 (98.7%)
# Gaps:           0/681 ( 0.0%)
# Score: 3324.0
# 
#
#=======================================

BSNT_05984___      1 ATGAGGCGAATAGGCTTGTGTATAAGCCTGCTGGTCACAGTTCTTGTGAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx      1 ATGAGGCGAATAGGCTTGTGTATAAGCCTGCTGGTCACAGTTCTTGTGAT     50

BSNT_05984___     51 GAGCGCATGCGAAAGTGAAGGTGAGGCTCAGATGTTCGCAGACTGTGATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx     51 GAGCGCATGCGAAAGTGAAGGTGAGGCTCAGATGTTCGCAGACTGTGATC    100

BSNT_05984___    101 AAAAGACGGTAAAACAAACCGCAGCCAAACCGATGAGCAGTAAGAAAAAG    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx    101 AAAAGACAGTAAAACAAACCGCAGCCAAACCGATGAGCAGTAAGAAAAAG    150

BSNT_05984___    151 CAGGATTTCCAAGCCCTCGCAAGCGACAGGCAGCTGGCCATTGTGTTCAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx    151 CAGGATTTCCAAGCCCTCGCAAGCGACAGGCAGCTGGCCATTGTGTTCAG    200

BSNT_05984___    201 TTCCATGATACAAGTGAGCGAAGCATTTGATTATGGAATCGGCAATCCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx    201 TTCCATGATACAAGTGAGCGAAGCATTTGATTATGGAATCGGCAATCCAG    250

BSNT_05984___    251 AATACTTCGTGCGAATCAGCATGACTGAAGAAGAAGCAGACATTGCGAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx    251 AATACTTCGTGCGAATCAGCATGACTGAAGAAGAAGCAGACATTGCGAAG    300

BSNT_05984___    301 GAGAATCTCGAATCGATTAAGCTTGAGAACAAATCGCTCAAAAAACAAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx    301 GAGAATCTCGAATCGATTAAGCTTGAGAACAAATCGCTCAAAAAACAAAA    350

BSNT_05984___    351 CAGCGAGGCGGTTGCCTTGCTACAAAAAACGCGTAATCAAGACATGAGCC    400
                     |||||||||||||||||||||.||||||||||||||||||||.|||||||
BSU39090___yx    351 CAGCGAGGCGGTTGCCTTGCTTCAAAAAACGCGTAATCAAGATATGAGCC    400

BSNT_05984___    401 GCATCGAAATTCAGCAGCTGACAGAAAATAGAGCCGCTTTTTTTGAGGCC    450
                     ||||||||||||||||||||||||||||||||||||.||||||||||.||
BSU39090___yx    401 GCATCGAAATTCAGCAGCTGACAGAAAATAGAGCCGGTTTTTTTGAGACC    450

BSNT_05984___    451 GCAGACAGTATGATCAAACTCATCGGCCAAGTCACACCGAAAAACGCGAA    500
                     ||||||||||||||||||||||||..||||||||||||||||||||||||
BSU39090___yx    451 GCAGACAGTATGATCAAACTCATCAACCAAGTCACACCGAAAAACGCGAA    500

BSNT_05984___    501 GAAGACAAGACAGCAGCTGGATCAGCTGAAAAAACAATATACACAATACA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx    501 GAAGACAAGACAGCAGCTGGATCAGCTGAAAAAACAATATACACAATACA    550

BSNT_05984___    551 GCGCTGAAAGCATTAAAATCATGAACAGCATTGTCAAAAAGCAGAAAGCT    600
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx    551 GTGCTGAAAGCATTAAAATCATGAACAGCATTGTCAAAAAGCAGAAAGCT    600

BSNT_05984___    601 GACAAGGCATCATTTGAACGCCATCTGGAGGCGCTGCTTCAAAAACAGCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39090___yx    601 GACAAGGCATCATTTGAACGCCATCTGGAGGCGCTGCTTCAAAAACAGCC    650

BSNT_05984___    651 GGGGCAGCAGGTACGGAGTGAATTGTACTGA    681
                     .||||||||||||||||||||||||||||||
BSU39090___yx    651 CGGGCAGCAGGTACGGAGTGAATTGTACTGA    681


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