Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05982 and BSU39080

See Amino acid alignment / Visit BSNT_05982 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence dna-align/BSNT_05982___licT.1.22522.seq
#    -bsequence dna-align/BSU39080___licT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05982___licT-BSU39080___licT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05982___licT-BSU39080___licT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05982___licT
# 2: BSU39080___licT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 834
# Identity:     830/834 (99.5%)
# Similarity:   830/834 (99.5%)
# Gaps:           0/834 ( 0.0%)
# Score: 4134.0
# 
#
#=======================================

BSNT_05982___      1 ATGAAAATTGCGAAGGTGATCAACAATAATGTGATCAGCGTGGTCAATGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li      1 ATGAAAATTGCGAAGGTGATCAACAATAATGTGATCAGCGTGGTCAATGA     50

BSNT_05982___     51 ACAGGGGAAAGAATTGGTCGTCATGGGCAGGGGGCTCGCGTTTCAGAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li     51 ACAGGGGAAAGAATTGGTCGTCATGGGCAGGGGGCTCGCGTTTCAGAAAA    100

BSNT_05982___    101 AGTCCGGCGATGATGTCGATGAAGCCCGCATTGAGAAAGTGTTCACGCTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    101 AGTCCGGCGATGATGTCGATGAAGCCCGCATTGAGAAAGTGTTCACGCTC    150

BSNT_05982___    151 GATAACAAGGATGTATCAGAAAAGTTCAAAACCCTTTTGTATGATATACC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    151 GATAACAAGGATGTATCAGAAAAGTTCAAAACCCTTTTGTATGATATACC    200

BSNT_05982___    201 GATCGAGTGTATGGAAGTATCCGAAGAGATTATCAGCTACGCAAAATTAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    201 GATCGAGTGTATGGAAGTATCCGAAGAGATTATCAGCTACGCAAAATTAC    250

BSNT_05982___    251 AGCTCGGCAAAAAGCTCAACGACAGCATCTATGTGTCGCTGACCGACCAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    251 AGCTCGGCAAAAAGCTCAACGACAGCATCTATGTGTCGCTGACCGACCAT    300

BSNT_05982___    301 ATTAACTTTGCCATCCAGCGCAACCAGAAAGGGCTTGATATCAAAAACGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    301 ATTAACTTTGCCATCCAGCGCAACCAGAAAGGGCTTGATATCAAAAACGC    350

BSNT_05982___    351 CTTGCTGTGGGAAACAAAACGGCTGTACAAAGACGAATTTGCGATCGGCA    400
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU39080___li    351 CTTGCTGTGGGAAACAAAACGGCTCTACAAAGACGAATTTGCGATCGGCA    400

BSNT_05982___    401 AAGAAGCGTTGGTTATGGTAAAAAACAAGACAGGTGTGTCTCTGCCAGAG    450
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU39080___li    401 AAGAAGCGTTGGTTATGGTAAAAAACAAGACTGGTGTGTCTCTGCCAGAG    450

BSNT_05982___    451 GATGAAGCAGGCTTTATTGCTCTGCATATTGTAAATGCCGAGCTGAATGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    451 GATGAAGCAGGCTTTATTGCTCTGCATATTGTAAATGCCGAGCTGAATGA    500

BSNT_05982___    501 AGAGATGCCCAATATTATCAACATTACAAAAGTCATGCAAGAGATTTTGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    501 AGAGATGCCCAATATTATCAACATTACAAAAGTCATGCAAGAGATTTTGA    550

BSNT_05982___    551 GTATTGTAAAATACCATTTTAAGATTGAATTCAACGAAGAATCGCTTCAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    551 GTATTGTAAAATACCATTTTAAGATTGAATTCAACGAAGAATCGCTTCAC    600

BSNT_05982___    601 TATTATCGGTTCGTCACCCACTTAAAATTTTTCGCGCAACGTCTATTTAA    650
                     ||||||||||||||||||||||||||.|||||||||||.|||||||||||
BSU39080___li    601 TATTATCGGTTCGTCACCCACTTAAAGTTTTTCGCGCAGCGTCTATTTAA    650

BSNT_05982___    651 CGGCACTCACATGGAAAGCCAGGACGATTTTTTGCTGGATACAGTGAAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    651 CGGCACTCACATGGAAAGCCAGGACGATTTTTTGCTGGATACAGTGAAAG    700

BSNT_05982___    701 AAAAGTATCATCGCGCGTATGAATGCACGAAGAAAATCCAAACCTACATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    701 AAAAGTATCATCGCGCGTATGAATGCACGAAGAAAATCCAAACCTACATT    750

BSNT_05982___    751 GAGCGGGAGTATGAGCACAAGCTCACAAGTGACGAGCTGCTGTATTTAAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39080___li    751 GAGCGGGAGTATGAGCACAAGCTCACAAGTGACGAGCTGCTGTATTTAAC    800

BSNT_05982___    801 CATTCACATAGAAAGGGTAGTTAAACAAGCATAA    834
                     ||||||||||||||||||||||||||||||||||
BSU39080___li    801 CATTCACATAGAAAGGGTAGTTAAACAAGCATAA    834


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