Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05976 and BSU39040

See Amino acid alignment / Visit BSNT_05976 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence dna-align/BSNT_05976___yxiS.1.22522.seq
#    -bsequence dna-align/BSU39040___yxiS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05976___yxiS-BSU39040___yxiS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05976___yxiS-BSU39040___yxiS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05976___yxiS
# 2: BSU39040___yxiS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     287/291 (98.6%)
# Similarity:   287/291 (98.6%)
# Gaps:           0/291 ( 0.0%)
# Score: 1419.0
# 
#
#=======================================

BSNT_05976___      1 ATGAACGAAAAACAGCTCGCTGAAGCTTACGAACGCGATGAAAATATGAT     50
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU39040___yx      1 ATGAACGAAAAACAGCTCACTGAAGCTTACGAACGCGATGAAAATATGAT     50

BSNT_05976___     51 GATTTTGGTGTTTGCCCAATGGTGCGTGAACCATGATCTTGATCCGATGG    100
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU39040___yx     51 GATTTTGGTGTTTGCCCAGTGGTGCGTGAACCATGATCTTGATCCGATGG    100

BSNT_05976___    101 AGCTGTACGCCAAAGCGTATCCGCAGCAAAAGCTGAATGAAAGCTTGAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39040___yx    101 AGCTGTACGCCAAAGCGTATCCGCAGCAAAAGCTGAATGAAAGCTTGAAA    150

BSNT_05976___    151 AAAACCATGGACGATCTGGTCGTGCCAAAACACGAAGCAGAGCACATTCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39040___yx    151 AAAACCATGGACGATCTGGTCGTGCCAAAACACGAAGCAGAGCACATTCC    200

BSNT_05976___    201 GGACCAGACTGTCATTGCGGTATTAGAGATGTTCGGAAATACAGATTTGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39040___yx    201 GGACCAGACTGTCATTGCGGTATTAGAGATGTTCGGAAATACAGATTTGG    250

BSNT_05976___    251 CACAGGCCGTTCATGAAGCGATTTCTGGGCGCAAACAGTAA    291
                     ||||.|||.||||||||||||||||||||||||||||||||
BSU39040___yx    251 CACAAGCCCTTCATGAAGCGATTTCTGGGCGCAAACAGTAA    291


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