Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05965 and BSU38980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:20
# Commandline: needle
# -asequence dna-align/BSNT_05965___scoB.1.22522.seq
# -bsequence dna-align/BSU38980___scoB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05965___scoB-BSU38980___scoB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05965___scoB-BSU38980___scoB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05965___scoB
# 2: BSU38980___scoB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 651
# Identity: 645/651 (99.1%)
# Similarity: 645/651 (99.1%)
# Gaps: 0/651 ( 0.0%)
# Score: 3201.0
#
#
#=======================================
BSNT_05965___ 1 GTGAAGGAAGCGAGAAAACGAATGGTCAAACGGGCTGTACAAGAAATCAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38980___sc 1 GTGAAGGAAGCGAGAAAACGAATGGTCAAACGGGCTGTACAAGAAATCAA 50
BSNT_05965___ 51 GGACGGCATGAATGTGAATCTCGGGATTGGAATGCCGACGCTTGTCACAA 100
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38980___sc 51 GGACGGCATGAATGTGAATCTCGGGATTGGAATGCCGACGCTTGTCGCAA 100
BSNT_05965___ 101 ATGAGATACCCGATGGCGTTCACGTCATGCTTCAGTCGGAAAACGGCTTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38980___sc 101 ATGAGATACCCGATGGCGTTCACGTCATGCTTCAGTCGGAAAACGGCTTG 150
BSNT_05965___ 151 CTCGGAATTGGCCCCTATCCTCTGGAAGGAACGGAAGACGCGGATTTGAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38980___sc 151 CTCGGAATTGGCCCCTATCCTCTGGAAGGAACGGAAGACGCGGATTTGAT 200
BSNT_05965___ 201 CAATGCGGGAAAGGAAACGATCACTGAAGTGACCGGCGCCTCTTATTTTG 250
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU38980___sc 201 CAATGCGGGAAAGGAAACGATCACTGAAGTGACAGGCGCCTCTTATTTTG 250
BSNT_05965___ 251 ACAGCGCTGAGTCATTCGCGATGATAAGAGGCGGGCATATCGATTTGGCT 300
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38980___sc 251 ACAGCGCTGAGTCATTCGCGATGATAAGAGGCGGGCATATCGATTTAGCT 300
BSNT_05965___ 301 ATTCTCGGCGGAATGGAGGTTTCGGAGCAGGGGGATTTGGCCAATTGGAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38980___sc 301 ATTCTCGGCGGAATGGAGGTTTCGGAGCAGGGGGATTTGGCCAATTGGAT 350
BSNT_05965___ 351 GATCCCGGGCAAAATGGTAAAAGGGATGGGCGGCGCCATGGATCTCGTCA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38980___sc 351 GATCCCGGGCAAAATGGTAAAAGGGATGGGCGGCGCCATGGATCTCGTCA 400
BSNT_05965___ 401 ACGGGGCGAAACGAATCGTTGTCATCATGGATCACGTCAATAAGCATGGT 450
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38980___sc 401 ACGGGGCGAAACGAATCGTTGTCATCATGGAGCACGTCAATAAGCATGGT 450
BSNT_05965___ 451 GAATTAAAGGTGAAAAAAACATGCTCCCTTCCGCTGACAGGCCAGAAAGT 500
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU38980___sc 451 GAATCAAAGGTGAAAAAAACATGCTCCCTTCCGCTGACAGGCCAGAAAGT 500
BSNT_05965___ 501 CGTGCACAGGCTGATTACGGATTTGGCTGTATTTGATTTTGTGAACGGCC 550
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU38980___sc 501 CGTACACAGGCTGATTACGGATTTGGCTGTATTTGATTTTGTGAACGGCC 550
BSNT_05965___ 551 GCATGACACTGACGGAGCTTCAGGATGGTGTCACAATTGAAGAGGTTTAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38980___sc 551 GCATGACACTGACGGAGCTTCAGGATGGTGTCACAATTGAAGAGGTTTAT 600
BSNT_05965___ 601 GAAAAAACAGAAGCTGATTTCGCTGTAAGCCAGTCTGTACTCAATTCTTA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38980___sc 601 GAAAAAACAGAAGCTGATTTCGCTGTAAGCCAGTCTGTACTCAATTCTTA 650
BSNT_05965___ 651 A 651
|
BSU38980___sc 651 A 651
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