Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05962 and BSU38960

See Amino acid alignment / Visit BSNT_05962 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:20
# Commandline: needle
#    -asequence dna-align/BSNT_05962___yxjG.1.22522.seq
#    -bsequence dna-align/BSU38960___yxjG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05962___yxjG-BSU38960___yxjG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05962___yxjG-BSU38960___yxjG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05962___yxjG
# 2: BSU38960___yxjG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1137
# Identity:    1105/1137 (97.2%)
# Similarity:  1105/1137 (97.2%)
# Gaps:           0/1137 ( 0.0%)
# Score: 5397.0
# 
#
#=======================================

BSNT_05962___      1 ATGTCACAACAAACAACACCCGCAGAACAAAAATCACTTCAAAGAAAAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx      1 ATGTCACAACAAACAACACCCGCAGAACAAAAATCACTTCAAAGAAAAAA     50

BSNT_05962___     51 ACCGCCGTTTCGCGCGGATCAAGTCGGAAGCCTGTTGAGATCTGAGCCCG    100
                     ||||||||||||||||||||||||||||||||||.|.|||||||||||||
BSU38960___yx     51 ACCGCCGTTTCGCGCGGATCAAGTCGGAAGCCTGCTAAGATCTGAGCCCG    100

BSNT_05962___    101 TTAAAAAAGCGCGGCTGCAAAAAGCGGCCGGCGATATTACGGCTGAGCAG    150
                     |.||||||||||||||||||||||||||||||||.||.||.|||||||||
BSU38960___yx    101 TCAAAAAAGCGCGGCTGCAAAAAGCGGCCGGCGAAATGACCGCTGAGCAG    150

BSNT_05962___    151 CTTCGCCAGATCGAAAACGATGAAATTATCCGCATTGTGGAAAAACAGAA    200
                     ||||||||.||.||||||||.|||||.|||||||||||||||||||||||
BSU38960___yx    151 CTTCGCCAAATTGAAAACGACGAAATCATCCGCATTGTGGAAAAACAGAA    200

BSNT_05962___    201 GGAAACCGGCCTGAACGTCGTGACAGACGGTGAATTCCGCAGAGCATGGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx    201 GGAAACCGGCCTGAACGTCGTGACAGACGGTGAATTCCGCAGAGCATGGT    250

BSNT_05962___    251 GGCACTTTGATTTCCTGGAAAACTTAGATGGCGTTGAGCCGTTTACTCCT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx    251 GGCACTTTGATTTCCTGGAAAACTTAGATGGCGTTGAGCCGTTTACTCCT    300

BSNT_05962___    301 GAGCAAGGCATTCAATTCCATAACGTACAGACAAAAGCACGCGGCATTAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx    301 GAGCAAGGCATTCAATTCCATAACGTACAGACAAAAGCACGCGGCATTAA    350

BSNT_05962___    351 AGTCACAGGTGATATCGACTTTTCAACTCACCCAATGCTTGAAGATTACT    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38960___yx    351 AGTCACAGGCGATATCGACTTTTCAACTCACCCAATGCTTGAAGATTACT    400

BSNT_05962___    401 CATTTCTCCATAGCATTGCCGGTGACGCGACGCCAAAGATGACGATTCCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx    401 CATTTCTCCATAGCATTGCCGGTGACGCGACGCCAAAGATGACGATTCCA    450

BSNT_05962___    451 AGCCCGAATATGCTGTTTTTCCGCGGAAAATTGGAAAAAGGTGCATACAA    500
                     ||.|||||||||||||||||||||||||||.|||||||.|.||.||||||
BSU38960___yx    451 AGTCCGAATATGCTGTTTTTCCGCGGAAAACTGGAAAAGGATGAATACAA    500

BSNT_05962___    501 AAACGACTATCACCTTTTCCAGCATGATGTATCCAAAGCATATAAAAAAG    550
                     ||||||.|||||.|||||||||||.|||||||||||||||||||||||||
BSU38960___yx    501 AAACGATTATCAACTTTTCCAGCACGATGTATCCAAAGCATATAAAAAAG    550

BSNT_05962___    551 CGATTCAAGCGTTTTATGACAGAGGCTGCCGCTACCTCCAGCTTGATGAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx    551 CGATTCAAGCGTTTTATGACAGAGGCTGCCGCTACCTCCAGCTTGATGAT    600

BSNT_05962___    601 ACAGCGTGGGCCGTTTTCTTATCTGAAAAAGGCTTAAAACAAATCGAAGC    650
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU38960___yx    601 ACAGCGTGGGCCGTTTTCTTATCAGAAAAAGGCTTAAAACAAATCGAAGC    650

BSNT_05962___    651 GTTCGGAACAACGCCTGACGAGCTTCGTCAGCTGTTTGCGAAATCCATTA    700
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38960___yx    651 GTTCGGAACAACGCCTGACGAGCTTCGCCAGCTGTTTGCGAAATCCATTA    700

BSNT_05962___    701 ATGACGCGATTGCAGACCGTCCTGATGACTTGACCGTAACCATGCATATT    750
                     |.|||||||||||||||||.||.|||||||||||.|||||||||||||||
BSU38960___yx    701 ACGACGCGATTGCAGACCGCCCGGATGACTTGACGGTAACCATGCATATT    750

BSNT_05962___    751 TGCCGCGGCAACTTCCAGTCCACTTGGACAGCGGAAGGCGGCTATGACGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx    751 TGCCGCGGCAACTTCCAGTCCACTTGGACAGCGGAAGGCGGCTATGACGC    800

BSNT_05962___    801 AGCAGCCGAAACCATTTTTGACGGCTTGAATCTTGACGGCCTTTTCTTAG    850
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU38960___yx    801 AGCAGCCGAAACCATTTTTGACGGCTTGAATCTTGACGGACTTTTCTTAG    850

BSNT_05962___    851 AGTATGATGATTCACGCTCAGGCGGATTTGAGCCGCTCCGTTACGTAAAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx    851 AGTATGATGATTCACGCTCAGGCGGATTTGAGCCGCTCCGTTACGTAAAA    900

BSNT_05962___    901 CGGCCTGATCTTCAGCTTGTTCTTGGCTTAGTGACATCTAAATTCGGTGA    950
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx    901 CGGTCTGATCTTCAGCTTGTTCTTGGCTTAGTGACATCTAAATTCGGTGA    950

BSNT_05962___    951 GCTTGAACATCCGGACGATGTAAAACGCCGTATCGAAGAAGCATCCCGTT   1000
                     |||||||.|||||||.||.||.||||||||||||||||||||.|||||||
BSU38960___yx    951 GCTTGAAAATCCGGATGACGTGAAACGCCGTATCGAAGAAGCGTCCCGTT   1000

BSNT_05962___   1001 ATGTAAGCTTAGACCAGCTTTGCCTCAGCCCTCAATGCGGATTCGCTTCA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx   1001 ATGTAAGCTTAGACCAGCTTTGCCTCAGCCCTCAATGCGGATTCGCTTCA   1050

BSNT_05962___   1051 ACTGAGGAAGGCAACAAGCTGACTGAAGAACAGCAATGGGCGAAGCTCCG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38960___yx   1051 ACTGAGGAAGGCAACAAGCTGACTGAAGAACAGCAATGGGCGAAGCTCCG   1100

BSNT_05962___   1101 CCATGTGGTTGAGATCGCTAATGATGTTTGGAAATAA   1137
                     |||||||||||||||||||||||||||||||||||||
BSU38960___yx   1101 CCATGTGGTTGAGATCGCTAATGATGTTTGGAAATAA   1137


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