Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05960 and BSU38940

See Amino acid alignment / Visit BSNT_05960 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:19
# Commandline: needle
#    -asequence dna-align/BSNT_05960___yxjI.1.22522.seq
#    -bsequence dna-align/BSU38940___yxjI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05960___yxjI-BSU38940___yxjI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05960___yxjI-BSU38940___yxjI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05960___yxjI
# 2: BSU38940___yxjI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 489
# Identity:     484/489 (99.0%)
# Similarity:   484/489 (99.0%)
# Gaps:           0/489 ( 0.0%)
# Score: 2400.0
# 
#
#=======================================

BSNT_05960___      1 ATGATCGAGTTATTTATGAAACAAAAAATGTTCTCATTTAAAGATGCATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38940___yx      1 ATGATCGAGTTATTTATGAAACAAAAAATGTTCTCATTTAAAGATGCATT     50

BSNT_05960___     51 TCACATTTATGACCGGGATGAACAAGAAACATTCAAGGTGGAGGGGCGTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38940___yx     51 TCACATTTATGACCGGGATGAACAAGAAACATTCAAGGTGGAGGGGCGTT    100

BSNT_05960___    101 TTTTCTCGTTAGGAGACTCATTACAAATGACAGACTCATCTGGGAAAACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38940___yx    101 TTTTCTCGTTAGGAGACTCATTACAAATGACAGACTCATCTGGGAAAACG    150

BSNT_05960___    151 CTCGTTTCCATAGAACAAAAACTAATGTCTTTATTGCCGCGCTATGAGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38940___yx    151 CTCGTTTCCATAGAACAAAAACTAATGTCTTTATTGCCGCGCTATGAGAT    200

BSNT_05960___    201 TTCAATTGGCGGGAAAACAGTTTGTGAGGTAACGAAGAAAGTAACGTTTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38940___yx    201 TTCAATTGGCGGGAAAACAGTTTGTGAGGTAACGAAGAAAGTAACGTTTT    250

BSNT_05960___    251 TCAAACCGAAATTTGTGATTTCCGGGCTTAACTGGGAAATCGATGGTGAT    300
                     .|||||||||||||||||||||||||||||||||||||||.|||||||||
BSU38940___yx    251 CCAAACCGAAATTTGTGATTTCCGGGCTTAACTGGGAAATAGATGGTGAT    300

BSNT_05960___    301 TTATGGAGGGATGAATTCCAGCTGACGGACGGGGAAAATGTCCGGATGTC    350
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU38940___yx    301 TTATGGAGGGATGAATTCCAACTGACGGACGGGGAAAATGTCCGGATGTC    350

BSNT_05960___    351 AGTGAGCAAAAAGTGGCTCAGTTGGGGTGATTCCTATCACTTGCAGATTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38940___yx    351 AGTGAGCAAAAAGTGGCTCAGTTGGGGTGATTCCTATCACTTGCAGATTG    400

BSNT_05960___    401 CAAACGAGGGAGATGTTCTGATTTGCACTGCCATCGCTATCGTGCTTGAT    450
                     ||.||||||.||||||||||||||||||||||||||||||||||||||||
BSU38940___yx    401 CATACGAGGAAGATGTTCTGATTTGCACTGCCATCGCTATCGTGCTTGAT    450

BSNT_05960___    451 ATGGTTTTATATAACGATGAAGATGAAAGTATTTTCTAA    489
                     |||||||||||||||||||||||||||||||||||||||
BSU38940___yx    451 ATGGTTTTATATAACGATGAAGATGAAAGTATTTTCTAA    489


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