Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05952 and BSU38900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:19
# Commandline: needle
# -asequence dna-align/BSNT_05952___yxjM.1.22522.seq
# -bsequence dna-align/BSU38900___yxjM.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05952___yxjM-BSU38900___yxjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05952___yxjM-BSU38900___yxjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05952___yxjM
# 2: BSU38900___yxjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1233
# Identity: 1156/1233 (93.8%)
# Similarity: 1156/1233 (93.8%)
# Gaps: 21/1233 ( 1.7%)
# Score: 5507.5
#
#
#=======================================
BSNT_05952___ 1 ATGAACGGACAAACTCCGGCTCGGCACTACTACAAGAAGCTTGTGCCGAG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 1 ATGAACGGACAAACTCCGGCTCGGCACTACTACAAGAAGCTTGTGCCGAG 50
BSNT_05952___ 51 CCTTATTCTCATTTTGAATTGCATACAATTTTTATCTCACCCAGCCAAAG 100
|||||||||||||||||||||||||||||||||||||||.|||.|.||.|
BSU38900___yx 51 CCTTATTCTCATTTTGAATTGCATACAATTTTTATCTCATCCAACTAAGG 100
BSNT_05952___ 101 CTGATCCCATTTTGTTAGCATTTGTATTTGCGGTATACTTAGCATTCATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 101 CTGATCCCATTTTGTTAGCATTTGTATTTGCGGTATACTTAGCATTCATT 150
BSNT_05952___ 151 TGGATCATTCCCTATGTGGCATCCACTGCTGTTAGTTTGAGCATATTCAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 151 TGGATCATTCCCTATGTGGCATCCACTGCTGTTAGTTTGAGCATATTCAT 200
BSNT_05952___ 201 CGGACTCTGGCTCCTGACCGATTTCTTTTGGGCTGTTTCCGGCCAAGAGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 201 CGGACTCTGGCTCCTGACCGATTTCTTTTGGGCTGTTTCCGGCCAAGAGC 250
BSNT_05952___ 251 AGGGAGCCGCCTTTTTTTTACTCGTATTTTTAATGGTTTATGCAGCCATA 300
||||.|||||||.||||||..|.||||||||||||.|.|||||.|||.|.
BSU38900___yx 251 AGGGTGCCGCCTATTTTTTGATTGTATTTTTAATGATATATGCCGCCTTT 300
BSNT_05952___ 301 AAGCTTCCTGCACGGCTGTCTTTGATCCTTACAGTGTGCCTAATTGGGGG 350
|..||.|||.|||||||.||.||||||.|.||||..||..|||||||.||
BSU38900___yx 301 AGACTCCCTTCACGGCTATCCTTGATCTTCACAGCATGTTTAATTGGAGG 350
BSNT_05952___ 351 CAATGCTTTCTTTTT----GTATTCTGTTTTTGACA-----GCAGCTGGG 391
||| |.|.|| .|||.| |.||| |.||||.|.
BSU38900___yx 351 CAA------CATATTACTCCTATCC------TCACAAGGGGGAAGCTTGA 388
BSNT_05952___ 392 ACGATATCATCAGCAACATCTCGATCATGATCGGACTCTACGTCTTCTTC 441
|....||||||||||||||||||||||||.||||.||.||||||.|||||
BSU38900___yx 389 ATACCATCATCAGCAACATCTCGATCATGCTCGGTCTGTACGTCCTCTTC 438
BSNT_05952___ 442 TCCTCCATGCGTTTCAGACGAGAAGCGAGAAAGGAGGCTGAACGGAATCA 491
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38900___yx 439 TCCTCCATGCGTTTCAGACGAGAAGCGAGAAGGGAGGCTGAACGGAATCA 488
BSNT_05952___ 492 TGCTGAATTGGCAAAAATGCATGTGCAGCTGGAGCATGCTCATAAAGAAC 541
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 489 TGCTGAATTGGCAAAAATGCATGTGCAGCTGGAGCATGCTCATAAAGAAC 538
BSNT_05952___ 542 TCCAGAAAGCGCATGCAGAGCTGCAGGAGGCTTCTGTTCTTTCATTAAGG 591
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 539 TCCAGAAAGCGCATGCAGAGCTGCAGGAGGCTTCTGTTCTTTCATTAAGG 588
BSNT_05952___ 592 TACGCGGTCCTTGAGGAACGTACAAGAATCGCCCGCGACATTCATGACAG 641
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU38900___yx 589 TACGCGGTCCTTGAGGAACGTACAAGAATTGCCCGCGACATTCATGACAG 638
BSNT_05952___ 642 TATCGGTCACGAGCTGACTTCTGTGATTGTTCAGCTTCAATCTCTTCCCT 691
.|||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38900___yx 639 CATCGGTCACGAGCTGACTTCTGTGATTGTTCAGCTTCAATCCCTTCCCT 688
BSNT_05952___ 692 ATATCCTCAAAAGCAGCAAGGAGGATTCAGAAAAAGTCATTCAAAATGTA 741
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 689 ATATCCTTAAAAGCAGCAAGGAGGATTCAGAAAAAGTCATTCAAAATGTA 738
BSNT_05952___ 742 CTGAGTGTCGCCAGGGAATGTCTTCAAGAAGTACGGTCTGTCGTTCACCA 791
|||||||||||||||||.||||||||||||||.||||||||.||||||||
BSU38900___yx 739 CTGAGTGTCGCCAGGGAGTGTCTTCAAGAAGTGCGGTCTGTTGTTCACCA 788
BSNT_05952___ 792 AATGGGCCGTAGTGAATCGATGGTGGGGCTTACCGCTTTGCGGGGGCTCA 841
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 789 AATGGGCCGTAGTGAATCGATGGTGGGGCTTACCGCTTTGCGGGGGCTCA 838
BSNT_05952___ 842 TTCATCAAGTGGAGGAACGGAGCGGCTTGCACGTTTCTTTAGATACTGCC 891
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 839 TTCATCAAGTGGAGGAACGGAGCGGCTTGCACGTTTCTTTAGATACTGCC 888
BSNT_05952___ 892 GGACTGTCAGAAGAGTCTTGGCCTCCAAACGTGAGCGAAACGATCTACCG 941
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 889 GGACTGTCAGAAGAGTCTTGGCCTCCAAACGTGAGCGAAACGATCTACCG 938
BSNT_05952___ 942 TATCTTGCAGGAAGCGCTGACCAATATCATTCGTCACGCTGACGCTTCTC 991
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 939 CATCTTGCAGGAAGCGCTGACCAATATCATTCGTCACGCTGACGCTTCTC 988
BSNT_05952___ 992 ATGCGGCGGCCGTCATTTCTAACGACAAGTCCCATCTCTATGTCACAATC 1041
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU38900___yx 989 ATGCGGCGGCCGTCATTTCTAATGACAAGTCCCATCTCTATGTCACAATC 1038
BSNT_05952___ 1042 ACCGACGAAGGACAATTCACCGGCAGCCTTACTTATGGATTTGGCCTGAC 1091
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 1039 ACCGACGACGGACAATTCACCGGCAGCCTTACTTATGGATTTGGCCTGAC 1088
BSNT_05952___ 1092 AGGAATGAAAGAGCGCGCAGAAAAAGCAGGCGGTTCCCTTACTTTCAGTG 1141
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx 1089 AGGAATGAAAGAGCGCGCAGAAAAAGCAGGCGGTTCCCTTACTTTCAGTG 1138
BSNT_05952___ 1142 CCGTACAGCCGAGCGGCCTGAAAATTGAGCTGTCATTGCCGCTCACGACA 1191
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU38900___yx 1139 CCGTACAGCCGAGCGGCCTGAAAATTGAGCTGTCATTGCCGCTCATGACA 1188
BSNT_05952___ 1192 ACGCATAAGGAGCAAAAAGATGAACAAAGATAA 1224
|||.|||||||||||||||||||||||||||||
BSU38900___yx 1189 ACGAATAAGGAGCAAAAAGATGAACAAAGATAA 1221
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