Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_05947 and BSU38840

See Amino acid alignment / Visit BSNT_05947 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence dna-align/BSNT_05947___yxkD.1.22522.seq
#    -bsequence dna-align/BSU38840___yxkD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05947___yxkD-BSU38840___yxkD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05947___yxkD-BSU38840___yxkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05947___yxkD
# 2: BSU38840___yxkD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 837
# Identity:     834/837 (99.6%)
# Similarity:   834/837 (99.6%)
# Gaps:           0/837 ( 0.0%)
# Score: 4158.0
# 
#
#=======================================

BSNT_05947___      1 ATGAAAAAGAGAATGCTGGATGTACTTATGCTTGTGATTGGCGCTTTTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx      1 ATGAAAAAGAGAATGCTGGATGTACTTATGCTTGTGATTGGCGCTTTTTT     50

BSNT_05947___     51 CTTCGCGCTTGCGGTTAATTTATTTGCGATTCCCAATGATCTTGGGGAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx     51 CTTCGCGCTTGCGGTTAATTTATTTGCGATTCCCAATGATCTTGGGGAAG    100

BSNT_05947___    101 GCGGAGTCACTGGGATTACGCTGATTTTGTATTATCTGTTTCAATGGTCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    101 GCGGAGTCACTGGGATTACGCTGATTTTGTATTATCTGTTTCAATGGTCT    150

BSNT_05947___    151 CCTGGTGTCACGAACTTTATCTTAAATGCGTTTTTGCTTTTAATCGGCTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    151 CCTGGTGTCACGAACTTTATCTTAAATGCGTTTTTGCTTTTAATCGGCTA    200

BSNT_05947___    201 CAAGTTTCTTGATGGAAAAACAACGGTTTATACGATCATTGCGGTTGCGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    201 CAAGTTTCTTGATGGAAAAACAACGGTTTATACGATCATTGCGGTTGCGG    250

BSNT_05947___    251 CAAATTCGCTCTTTCTTCATCTGACACATGGGTGGAGCATTCCGTCTGAT    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38840___yx    251 CAAATTCGCTTTTTCTTCATCTGACACATGGGTGGAGCATTCCGTCTGAT    300

BSNT_05947___    301 GAATTGATCATTAATACGATTTTCGCAGGTGTATTTGCCGGAGTCGGGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    301 GAATTGATCATTAATACGATTTTCGCAGGTGTATTTGCCGGAGTCGGGAT    350

BSNT_05947___    351 CGGCATGATTATCCGGGTCGGCGGGACGACGGCTGGTTCCGCGATTCTGG    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU38840___yx    351 CGGCATGATTATCCGGGTCGGCGGGACGACGGCCGGTTCCGCGATTCTGG    400

BSNT_05947___    401 CCAGAATTGCTAATAAATATTTAGACTGGAATATCAGCTATGCACTCTTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    401 CCAGAATTGCTAATAAATATTTAGACTGGAATATCAGCTATGCACTCTTG    450

BSNT_05947___    451 TTTTTTGATTTAATCGTAGTATTCAGCTCTTATTTTATTATTGGTGCAGA    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU38840___yx    451 TTTTTTGATTTAATCGTAGTATTTAGCTCTTATTTTATTATTGGTGCAGA    500

BSNT_05947___    501 AAAAATGATGTTTACGATCGTGATGCTGTATATCGGTACCAAAGTGATGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    501 AAAAATGATGTTTACGATCGTGATGCTGTATATCGGTACCAAAGTGATGG    550

BSNT_05947___    551 ACTTCATTATTGAAGGTTTGAATACGAAAAAAGCCATTACGGTCATTTCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    551 ACTTCATTATTGAAGGTTTGAATACGAAAAAAGCCATTACGGTCATTTCA    600

BSNT_05947___    601 GAAAATAAGAGTGAGATTGCAGAGCAGGTAAATACCTTGATGGATCGGGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    601 GAAAATAAGAGTGAGATTGCAGAGCAGGTAAATACCTTGATGGATCGGGG    650

BSNT_05947___    651 CGTGACGATTTTATCAGGGAAGGGAAATTATACGGGCCAGTCAAAAGAGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    651 CGTGACGATTTTATCAGGGAAGGGAAATTATACGGGCCAGTCAAAAGAGA    700

BSNT_05947___    701 TTTTGTATATCGTCATTAACAAACAGGAGCTGTCTATGCTGAAAAAAATC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    701 TTTTGTATATCGTCATTAACAAACAGGAGCTGTCTATGCTGAAAAAAATC    750

BSNT_05947___    751 ATTAGAAGCTGCGACAAAAAAGCGTTTGTGATCGTACATGACGTACGCGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38840___yx    751 ATTAGAAGCTGCGACAAAAAAGCGTTTGTGATCGTACATGACGTACGCGA    800

BSNT_05947___    801 TGTGTTTGGCGAAGGGTTTGTGGATATATCTAAATAA    837
                     |||||||||||||||||||||||||||||||||||||
BSU38840___yx    801 TGTGTTTGGCGAAGGGTTTGTGGATATATCTAAATAA    837


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.