Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05945 and BSU38820

See Amino acid alignment / Visit BSNT_05945 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence dna-align/BSNT_05945___yxkF.1.22522.seq
#    -bsequence dna-align/BSU38820___yxkF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05945___yxkF-BSU38820___yxkF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05945___yxkF-BSU38820___yxkF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05945___yxkF
# 2: BSU38820___yxkF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity:     881/894 (98.5%)
# Similarity:   881/894 (98.5%)
# Gaps:           0/894 ( 0.0%)
# Score: 4353.0
# 
#
#=======================================

BSNT_05945___      1 ATGAAATCGCTGCTGGCTATTTATCCCGGTTCGATTGTGTCTGAGGAGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx      1 ATGAAATCGCTGCTGGCTATTTATCCCGGTTCGATTGTGTCTGAGGAGCT     50

BSNT_05945___     51 TTGCATAAGGGAAGGCTGTCTATGTTTTTTTGATGAGAGCAATCAGAGGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU38820___yx     51 TTGCATAAGGGAAGGCTGTCTATGTTTTTTTGATGAGAGCAATCAGAGAT    100

BSNT_05945___    101 ATATCTCCATTCCGAAAACAGAGATCAGTGAAAAAGAAGTATTGGTGCTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    101 ATATCTCCATTCCGAAAACAGAGATCAGTGAAAAAGAAGTATTGGTGCTG    150

BSNT_05945___    151 CAATCATTTTTGACGCCTGCGGATGAGGGCAATCAACTGTCTATGAAATC    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    151 CAGTCATTTTTGACGCCTGCGGATGAGGGCAATCAACTGTCTATGAAATC    200

BSNT_05945___    201 ACCTGAGGAAAACAAGTGGTTTTCGTTCCTTTTTTCCAGAGGGGAATTGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    201 ACCTGAGGAAAACAAGTGGTTTTCGTTCCTTTTTTCCAGAGGGGAATTGC    250

BSNT_05945___    251 CGGCGTACATAAAGAAACGGACGAGATTTGTTCACTTTCATTTATTCGGC    300
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    251 CGGCGTATATAAAGAAACGGACGAGATTTGTTCACTTTCATTTATTCGGC    300

BSNT_05945___    301 AAAATAGAAAGGACGTCCTTTACAGAAGCGGTTCGCCATTTTTGGCCGGT    350
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU38820___yx    301 AAAATAGAAAGGACGTCCTTTACGGAAGCGGTTCGCCATTTTTGGCCGGT    350

BSNT_05945___    351 GTCTTTTGTGATTGTGTGGATTCATGAGGACAGAGGCGTGATTGTCGAGC    400
                     |||||||||||||||||||||.||||||||||||||.|||||||||||||
BSU38820___yx    351 GTCTTTTGTGATTGTGTGGATCCATGAGGACAGAGGTGTGATTGTCGAGC    400

BSNT_05945___    401 AGGAAAGTGAAGCGGCGGCGAAGAAGGGCGAACTGGAATCGCTCGCAAAA    450
                     ||||||||||||||||||||.||||||.||||||||||||||||||.||.
BSU38820___yx    401 AGGAAAGTGAAGCGGCGGCGGAGAAGGACGAACTGGAATCGCTCGCTAAG    450

BSNT_05945___    451 GTTCTTGAAAGTGATTTCTACTTCAGTGTCCGTTTTTACGCCGGAAGATT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    451 GTTCTTGAAAGTGATTTCTACTTCAGTGTCCGTTTTTACGCCGGAAGATT    500

BSNT_05945___    501 TTACGAGCCGGATGAGTGTCTGCGAAAACATTACACTCGTGAACAGGCGT    550
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU38820___yx    501 TTACGAGCCGGATGAGTGTCTGCGAAAACATTACGCTCGTGAACAGGCGT    550

BSNT_05945___    551 ATTTCCTGTTTGCTGAAAAACGGCTGCCTCAGGTGCAGAGTGTGACCTTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    551 ATTTCCTGTTTGCTGAAAAACGGCTGCCTCAGGTGCAGAGTGTGACCTTT    600

BSNT_05945___    601 GAGATGATCTTTCCTTTTCTATTATTAGAAACAGAAAAAGAAAAACTGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    601 GAGATGATCTTTCCTTTTCTATTATTAGAAACAGAAAAAGAAAAACTGGA    650

BSNT_05945___    651 AACGCTGCTCTCTGAAGAAGCTGAGCTTTTATTTGGAAGTGAAGCTGAGC    700
                     |||.|||||||||||||||||||||||||||||||||||||||.||||||
BSU38820___yx    651 AACACTGCTCTCTGAAGAAGCTGAGCTTTTATTTGGAAGTGAATCTGAGC    700

BSNT_05945___    701 TAAGGAAGACCATTAAGCTGTTTATTGAAAACAACTCAAACGTCACATTA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    701 TAAGGAAGACCATTAAGCTGTTTATTGAAAACAACTCAAACGTCACATTA    750

BSNT_05945___    751 ACAGCGAAAAAGCTGCATCTGCATCGCAACAGCCTGCAATATCGGATTGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    751 ACAGCGAAAAAGCTGCATCTGCATCGCAACAGCCTGCAATATCGGATTGA    800

BSNT_05945___    801 TAAATTTATTGAGCGGTCAGGGATAGATATCAAATCGTACAAAGGCGCGC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    801 TAAATTTATTGAGCGGTCAGGGATAGATATCAAATCGTACAAAGGCGCGC    850

BSNT_05945___    851 TTCTTGCCTATTTTATCTGCCTGCAAAATGAAAGTTCAGAATAA    894
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU38820___yx    851 TTCTTGCCTATTTTATCTGCCTGCAAAATGAAAGTTCAGAATAA    894


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