Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05943 and BSU38810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:18
# Commandline: needle
# -asequence dna-align/BSNT_05943___msmX.1.22522.seq
# -bsequence dna-align/BSU38810___msmX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05943___msmX-BSU38810___msmX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05943___msmX-BSU38810___msmX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05943___msmX
# 2: BSU38810___msmX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1098
# Identity: 1082/1098 (98.5%)
# Similarity: 1082/1098 (98.5%)
# Gaps: 0/1098 ( 0.0%)
# Score: 5346.0
#
#
#=======================================
BSNT_05943___ 1 ATGGCTGAATTGCGGATGGAGCACATTTATAAATTTTATGATCAGAAGGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 1 ATGGCTGAATTGCGGATGGAGCACATTTATAAATTTTATGATCAGAAGGA 50
BSNT_05943___ 51 ACCGGCGGTTGATGACTTTAACCTTCATATTGCCGATAAGGAATTTATCG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 51 ACCGGCGGTTGATGACTTTAACCTTCATATTGCCGATAAGGAATTTATCG 100
BSNT_05943___ 101 TATTCGTCGGCCCGTCCGGCTGCGGGAAATCAACGACGCTGCGAATGGTC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 101 TATTCGTCGGCCCGTCCGGCTGCGGGAAATCAACGACGCTGCGAATGGTC 150
BSNT_05943___ 151 GCAGGACTTGAAGAAATTTCGAAAGGCGATTTTTATATTGAAGGAAAACG 200
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU38810___ms 151 GCAGGACTTGAAGAAATTTCGAAAGGTGATTTTTATATTGAAGGAAAACG 200
BSNT_05943___ 201 GGTCAATGATGTAGCGCCAAAGGACAGGGATATCGCGATGGTATTTCAGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 201 GGTCAATGATGTAGCGCCAAAGGACAGGGATATCGCGATGGTATTTCAGA 250
BSNT_05943___ 251 ACTACGCGCTCTATCCGCATATGACGGTCTACGATAATATCGCGTTCGGG 300
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38810___ms 251 ACTACGCGCTTTATCCGCATATGACGGTCTACGATAATATCGCGTTCGGG 300
BSNT_05943___ 301 CTCAAGCTTCGGAAAATGCCGAAGCCTGAAATCAAAAAAAGAGTAGAGGA 350
||||||||||||||||||||||||||||||||||||||||||||.||.||
BSU38810___ms 301 CTCAAGCTTCGGAAAATGCCGAAGCCTGAAATCAAAAAAAGAGTCGAAGA 350
BSNT_05943___ 351 AGCTGCTAAAATTCTCGGGCTGGAGGAATATTTGCACCGTAAACCGAAAG 400
|||.|||||||||||||||||.||||||||||||||||||||||||||||
BSU38810___ms 351 AGCCGCTAAAATTCTCGGGCTTGAGGAATATTTGCACCGTAAACCGAAAG 400
BSNT_05943___ 401 CGCTGTCAGGCGGACAGAGACAGCGGGTTGCGCTGGGCCGGGCAATCGTG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 401 CGCTGTCAGGCGGACAGAGACAGCGGGTTGCGCTGGGCCGGGCAATCGTG 450
BSNT_05943___ 451 CGGGATGCAAAGGTGTTCCTGATGGATGAGCCTTTGTCAAACCTGGACGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 451 CGGGATGCAAAGGTGTTCCTGATGGATGAGCCTTTGTCAAACCTGGACGC 500
BSNT_05943___ 501 GAAGCTGAGGGTGCAAATGCGGGCGGAAATCATTAAGCTCCACCAGAGAC 550
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU38810___ms 501 GAAGCTGAGGGTGCAAATGCGGGCGGAAATCATTAAGCTCCACCAGAGAT 550
BSNT_05943___ 551 TGCAGACTACAACGATTTATGTGACGCATGACCAGACAGAAGCGCTGACA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 551 TGCAGACTACAACGATTTATGTGACGCATGACCAGACAGAAGCGCTGACA 600
BSNT_05943___ 601 ATGGCGACACGGATTGTAGTCATGAAAGATGGGAAAATTCAGCAGATCGG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 601 ATGGCGACACGGATTGTAGTCATGAAAGATGGGAAAATTCAGCAGATCGG 650
BSNT_05943___ 651 GACGCCGAAGGATGTATATGAATTCCCTGAAAACGTCTTTGTCGGCGGGT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 651 GACGCCGAAGGATGTATATGAATTCCCTGAAAACGTCTTTGTCGGCGGGT 700
BSNT_05943___ 701 TTATCGGATCACCAGCGATGAACTTTTTCAAAGGGAAGCTCACGGATGGC 750
|||||||||||||.||||||||.|||||||||||.|||||||||||||||
BSU38810___ms 701 TTATCGGATCACCGGCGATGAATTTTTTCAAAGGAAAGCTCACGGATGGC 750
BSNT_05943___ 751 TTAATCAAAATCGGTTCTGCGGCATTAACCGTCCCGGAAGGAAAAATGAA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 751 TTAATCAAAATCGGTTCTGCGGCATTAACCGTCCCGGAAGGAAAAATGAA 800
BSNT_05943___ 801 AGTGCTGCGTGAAAAAGGCTACATCGGCAAAGAGGTCATCTTCGGCATCC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 801 AGTGCTGCGTGAAAAAGGCTACATCGGCAAAGAGGTCATCTTCGGCATCC 850
BSNT_05943___ 851 GTCCTGAGGATATACATGATGAATTGATTGTCGTGGAATCATATAAGAAC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms 851 GTCCTGAGGATATACATGATGAATTGATTGTCGTGGAATCATATAAGAAC 900
BSNT_05943___ 901 TCTTCGATTAAGGCCAAAATCAATGTTGCAGAGCTGCTCGGTTCTGAAAT 950
||||||||||||||.|||||.|||||||||||||||||||||||||||||
BSU38810___ms 901 TCTTCGATTAAGGCGAAAATTAATGTTGCAGAGCTGCTCGGTTCTGAAAT 950
BSNT_05943___ 951 CATGATTTATTCGCAGATCGACAACCAAGACTTTATTGCGCGGATCGACG 1000
.|||||||||||||||||.|||||||||||||||||||||||||||||||
BSU38810___ms 951 TATGATTTATTCGCAGATAGACAACCAAGACTTTATTGCGCGGATCGACG 1000
BSNT_05943___ 1001 CCCGCCTCGATATTCAATCGGGCGATGAGCTGACGGTCGCATTTGATATG 1050
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU38810___ms 1001 CCCGCCTCGATATTCAATCGGGCGATGAGCTGACGGTTGCATTTGATATG 1050
BSNT_05943___ 1051 AATAAAGGTCATTTCTTTGACAGTGAGACAGAAGTGAGAATCCGATAA 1098
||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38810___ms 1051 AATAAAGGCCATTTCTTTGACAGTGAGACAGAAGTGAGAATCCGATAA 1098
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