Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05943 and BSU38810

See Amino acid alignment / Visit BSNT_05943 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence dna-align/BSNT_05943___msmX.1.22522.seq
#    -bsequence dna-align/BSU38810___msmX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05943___msmX-BSU38810___msmX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05943___msmX-BSU38810___msmX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05943___msmX
# 2: BSU38810___msmX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1098
# Identity:    1082/1098 (98.5%)
# Similarity:  1082/1098 (98.5%)
# Gaps:           0/1098 ( 0.0%)
# Score: 5346.0
# 
#
#=======================================

BSNT_05943___      1 ATGGCTGAATTGCGGATGGAGCACATTTATAAATTTTATGATCAGAAGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms      1 ATGGCTGAATTGCGGATGGAGCACATTTATAAATTTTATGATCAGAAGGA     50

BSNT_05943___     51 ACCGGCGGTTGATGACTTTAACCTTCATATTGCCGATAAGGAATTTATCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms     51 ACCGGCGGTTGATGACTTTAACCTTCATATTGCCGATAAGGAATTTATCG    100

BSNT_05943___    101 TATTCGTCGGCCCGTCCGGCTGCGGGAAATCAACGACGCTGCGAATGGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    101 TATTCGTCGGCCCGTCCGGCTGCGGGAAATCAACGACGCTGCGAATGGTC    150

BSNT_05943___    151 GCAGGACTTGAAGAAATTTCGAAAGGCGATTTTTATATTGAAGGAAAACG    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU38810___ms    151 GCAGGACTTGAAGAAATTTCGAAAGGTGATTTTTATATTGAAGGAAAACG    200

BSNT_05943___    201 GGTCAATGATGTAGCGCCAAAGGACAGGGATATCGCGATGGTATTTCAGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    201 GGTCAATGATGTAGCGCCAAAGGACAGGGATATCGCGATGGTATTTCAGA    250

BSNT_05943___    251 ACTACGCGCTCTATCCGCATATGACGGTCTACGATAATATCGCGTTCGGG    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38810___ms    251 ACTACGCGCTTTATCCGCATATGACGGTCTACGATAATATCGCGTTCGGG    300

BSNT_05943___    301 CTCAAGCTTCGGAAAATGCCGAAGCCTGAAATCAAAAAAAGAGTAGAGGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||.||.||
BSU38810___ms    301 CTCAAGCTTCGGAAAATGCCGAAGCCTGAAATCAAAAAAAGAGTCGAAGA    350

BSNT_05943___    351 AGCTGCTAAAATTCTCGGGCTGGAGGAATATTTGCACCGTAAACCGAAAG    400
                     |||.|||||||||||||||||.||||||||||||||||||||||||||||
BSU38810___ms    351 AGCCGCTAAAATTCTCGGGCTTGAGGAATATTTGCACCGTAAACCGAAAG    400

BSNT_05943___    401 CGCTGTCAGGCGGACAGAGACAGCGGGTTGCGCTGGGCCGGGCAATCGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    401 CGCTGTCAGGCGGACAGAGACAGCGGGTTGCGCTGGGCCGGGCAATCGTG    450

BSNT_05943___    451 CGGGATGCAAAGGTGTTCCTGATGGATGAGCCTTTGTCAAACCTGGACGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    451 CGGGATGCAAAGGTGTTCCTGATGGATGAGCCTTTGTCAAACCTGGACGC    500

BSNT_05943___    501 GAAGCTGAGGGTGCAAATGCGGGCGGAAATCATTAAGCTCCACCAGAGAC    550
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU38810___ms    501 GAAGCTGAGGGTGCAAATGCGGGCGGAAATCATTAAGCTCCACCAGAGAT    550

BSNT_05943___    551 TGCAGACTACAACGATTTATGTGACGCATGACCAGACAGAAGCGCTGACA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    551 TGCAGACTACAACGATTTATGTGACGCATGACCAGACAGAAGCGCTGACA    600

BSNT_05943___    601 ATGGCGACACGGATTGTAGTCATGAAAGATGGGAAAATTCAGCAGATCGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    601 ATGGCGACACGGATTGTAGTCATGAAAGATGGGAAAATTCAGCAGATCGG    650

BSNT_05943___    651 GACGCCGAAGGATGTATATGAATTCCCTGAAAACGTCTTTGTCGGCGGGT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    651 GACGCCGAAGGATGTATATGAATTCCCTGAAAACGTCTTTGTCGGCGGGT    700

BSNT_05943___    701 TTATCGGATCACCAGCGATGAACTTTTTCAAAGGGAAGCTCACGGATGGC    750
                     |||||||||||||.||||||||.|||||||||||.|||||||||||||||
BSU38810___ms    701 TTATCGGATCACCGGCGATGAATTTTTTCAAAGGAAAGCTCACGGATGGC    750

BSNT_05943___    751 TTAATCAAAATCGGTTCTGCGGCATTAACCGTCCCGGAAGGAAAAATGAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    751 TTAATCAAAATCGGTTCTGCGGCATTAACCGTCCCGGAAGGAAAAATGAA    800

BSNT_05943___    801 AGTGCTGCGTGAAAAAGGCTACATCGGCAAAGAGGTCATCTTCGGCATCC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    801 AGTGCTGCGTGAAAAAGGCTACATCGGCAAAGAGGTCATCTTCGGCATCC    850

BSNT_05943___    851 GTCCTGAGGATATACATGATGAATTGATTGTCGTGGAATCATATAAGAAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38810___ms    851 GTCCTGAGGATATACATGATGAATTGATTGTCGTGGAATCATATAAGAAC    900

BSNT_05943___    901 TCTTCGATTAAGGCCAAAATCAATGTTGCAGAGCTGCTCGGTTCTGAAAT    950
                     ||||||||||||||.|||||.|||||||||||||||||||||||||||||
BSU38810___ms    901 TCTTCGATTAAGGCGAAAATTAATGTTGCAGAGCTGCTCGGTTCTGAAAT    950

BSNT_05943___    951 CATGATTTATTCGCAGATCGACAACCAAGACTTTATTGCGCGGATCGACG   1000
                     .|||||||||||||||||.|||||||||||||||||||||||||||||||
BSU38810___ms    951 TATGATTTATTCGCAGATAGACAACCAAGACTTTATTGCGCGGATCGACG   1000

BSNT_05943___   1001 CCCGCCTCGATATTCAATCGGGCGATGAGCTGACGGTCGCATTTGATATG   1050
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU38810___ms   1001 CCCGCCTCGATATTCAATCGGGCGATGAGCTGACGGTTGCATTTGATATG   1050

BSNT_05943___   1051 AATAAAGGTCATTTCTTTGACAGTGAGACAGAAGTGAGAATCCGATAA   1098
                     ||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38810___ms   1051 AATAAAGGCCATTTCTTTGACAGTGAGACAGAAGTGAGAATCCGATAA   1098


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