Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05940 and BSU38800

See Amino acid alignment / Visit BSNT_05940 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:17
# Commandline: needle
#    -asequence dna-align/BSNT_05940___yxkH.1.22522.seq
#    -bsequence dna-align/BSU38800___yxkH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05940___yxkH-BSU38800___yxkH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05940___yxkH-BSU38800___yxkH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05940___yxkH
# 2: BSU38800___yxkH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 840
# Identity:     832/840 (99.0%)
# Similarity:   832/840 (99.0%)
# Gaps:           0/840 ( 0.0%)
# Score: 4128.0
# 
#
#=======================================

BSNT_05940___      1 ATGAAACGATTGTTTTTAAGCATCTTTCTTTTGGGCAGCTGTTTGGCTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx      1 ATGAAACGATTGTTTTTAAGCATCTTTCTTTTGGGCAGCTGTTTGGCTCT     50

BSNT_05940___     51 TGCGGCTTGCGCTGATCAAGAGGCGAATGCAGAGCAGCCGATGCCAAAAG    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38800___yx     51 TGCGGCTTGTGCTGATCAAGAGGCGAATGCAGAGCAGCCGATGCCAAAAG    100

BSNT_05940___    101 CGGAACAAAAGAAACCGGAAAAAAAGGCAGTACAAGTTCAGAAAAAAGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    101 CGGAACAAAAGAAACCGGAAAAAAAGGCAGTACAAGTTCAGAAAAAAGAA    150

BSNT_05940___    151 GACGATACATCCGCATGGATCAAAACAGAGAAACCGGCAAAGCTGCCGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    151 GACGATACATCCGCATGGATCAAAACAGAGAAACCGGCAAAGCTGCCGAT    200

BSNT_05940___    201 TTTGATGTACCACAGCATTTCTTCAGGAAACAGCCTCCGTGTGCCAAAGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    201 TTTGATGTACCACAGCATTTCTTCAGGAAACAGCCTCCGTGTGCCAAAGA    250

BSNT_05940___    251 AAGAATTCGAGGCGCATATGAAGTGGCTTCATGATAACGGCTATCAGACA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    251 AAGAATTCGAGGCGCATATGAAGTGGCTTCATGATAACGGCTATCAGACA    300

BSNT_05940___    301 TTAACGCCGAAAGAGGCATATCTCATGCTGACGCAGGATAAAAAACCGAG    350
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU38800___yx    301 TTAACGCCGAAAGAGGCATCTCTCATGCTGACGCAGGATAAAAAACCGAG    350

BSNT_05940___    351 TGAGAAGTGCGTGCTGATCACATTTGATGACGGGTACACCGACAATTATC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    351 TGAGAAGTGCGTGCTGATCACATTTGATGACGGGTACACCGACAATTATC    400

BSNT_05940___    401 AAGATGCGTATCCGGTGCTGAAAAAGTACGGGATGAAGGCAACGATTTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    401 AAGATGCGTATCCGGTGCTGAAAAAGTACGGGATGAAGGCAACGATTTTT    450

BSNT_05940___    451 ATGATCGGCAAATCGATCGGACATAGGCACCATCTGACAGAGGACCAAAT    500
                     |||||||||||||||||||||||||.||||||||||||||||||.|||||
BSU38800___yx    451 ATGATCGGCAAATCGATCGGACATAAGCACCATCTGACAGAGGAACAAAT    500

BSNT_05940___    501 GAAGGAAATGGCACAGCACGGCATATCGATTGAAAGCCATACGATTGACC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    501 GAAGGAAATGGCACAGCACGGCATATCGATTGAAAGCCATACGATTGACC    550

BSNT_05940___    551 ACGTTGAGCTGAACGGATTAACGCCTCAACAGCAGCAAAGCGAGATGGCT    600
                     ||.|||||||||||||||||||||||||||||||||||||.|||||||||
BSU38800___yx    551 ACCTTGAGCTGAACGGATTAACGCCTCAACAGCAGCAAAGTGAGATGGCT    600

BSNT_05940___    601 GATTCGAAAAAGCTGTTCGACCACATGTTTCATCAGCAAACCACCATCAT    650
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU38800___yx    601 GATTCGAAAAAGCTGTTCGACAACATGTTTCATCAGCAAACCACCATCAT    650

BSNT_05940___    651 CAGCTATCCGGTAGGGCGCTACAATGAGGAGACGCTGAAGGCCGCTGAAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    651 CAGCTATCCGGTAGGGCGCTACAATGAGGAGACGCTGAAGGCCGCTGAAA    700

BSNT_05940___    701 AAACAGGCTATCAAATGGGCGTGACGACAGAACCGGGCGCGGCTTCGAGA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    701 AAACAGGCTATCAAATGGGCGTGACGACAGAACCGGGCGCGGCTTCGAGA    750

BSNT_05940___    751 GACCAGGGAATGTATGCCCTCCATCGTGTGCGCGTGTCCCCAGGCATGTC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38800___yx    751 GACCAGGGAATGTATGCCCTCCATCGTGTGCGCGTGTCCCCAGGCATGTC    800

BSNT_05940___    801 GGGCTCGGCTTTTGGTGCGTACATCGAATCAATGAAATAA    840
                     .|||||||||||||||||||||||||||||||||||||||
BSU38800___yx    801 AGGCTCGGCTTTTGGTGCGTACATCGAATCAATGAAATAA    840


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