Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05929 and BSU38730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:16
# Commandline: needle
# -asequence dna-align/BSNT_05929___cydD.1.22522.seq
# -bsequence dna-align/BSU38730___cydD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05929___cydD-BSU38730___cydD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05929___cydD-BSU38730___cydD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05929___cydD
# 2: BSU38730___cydD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1728
# Identity: 1697/1728 (98.2%)
# Similarity: 1697/1728 (98.2%)
# Gaps: 0/1728 ( 0.0%)
# Score: 8361.0
#
#
#=======================================
BSNT_05929___ 1 ATGAAGAAAGAAGAATGGATTTTGCCGTATATCAAGCAAAATGCCCGCCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1 ATGAAGAAAGAAGAATGGATTTTGCCGTATATCAAGCAAAATGCCCGCCT 50
BSNT_05929___ 51 GTTTGTTCTGGTTATCTTTTTGGGCGGGGTGACGATTTTTTCTGCTGCTT 100
|||.||||||||||||||||||||.|.|||||||||||||||||||||||
BSU38730___cy 51 GTTCGTTCTGGTTATCTTTTTGGGTGCGGTGACGATTTTTTCTGCTGCTT 100
BSNT_05929___ 101 TTCTCATGTTCACCTCAGGGTTTTTGATTTCTAAAGCGGCGACAAGGCCG 150
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU38730___cy 101 TTCTCATGTTCACCTCAGGTTTTTTGATTTCTAAAGCGGCGACAAGGCCG 150
BSNT_05929___ 151 GAAAATATTCTGCTTATTTATGTGCCGATTGTCGCTGTGCGCACCTTTGG 200
|||||.||||||||.|||||||||||||||||||||||||||||||||||
BSU38730___cy 151 GAAAACATTCTGCTCATTTATGTGCCGATTGTCGCTGTGCGCACCTTTGG 200
BSNT_05929___ 201 GATTGCGCGCTCTGTTTCGCGATATGTGGAACGGCTCGTCGGGCATCACA 250
|||||||||||||||.||||||||||||||||||||||||||.|||||||
BSU38730___cy 201 GATTGCGCGCTCTGTGTCGCGATATGTGGAACGGCTCGTCGGCCATCACA 250
BSNT_05929___ 251 TCATTTTGAAAATCGTATCCGACATGCGCGTCCGCCTTTACAATATGCTT 300
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU38730___cy 251 TCATTTTGAAAATCGTATCTGACATGCGCGTCCGCCTTTACAATATGCTT 300
BSNT_05929___ 301 GAGCCGGGTGCTTTGATGCTGCGTTCCCGTTTTCGCACGGGGGATATGCT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 301 GAGCCGGGTGCTTTGATGCTGCGTTCCCGTTTTCGCACGGGGGATATGCT 350
BSNT_05929___ 351 CGGCATTTTGTCTGAGGATATTGAGCATTTGCAGGATGCTTTCTTAAAAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 351 CGGCATTTTGTCTGAGGATATTGAGCATTTGCAGGATGCTTTCTTAAAAA 400
BSNT_05929___ 401 CGATTTTTCCTGCGATCTCAGCCTTGTTCCTGTATGCTGTGTCAGTGATA 450
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU38730___cy 401 CGATTTTTCCTGCGATCTCAGCCTTGCTCCTGTATGCTGTGTCAGTGATA 450
BSNT_05929___ 451 GCGCTTGGCTTCTTCTCTTGGCCGTTTGCCATATTGCTTGCGCTTTATTT 500
|||||.||||||||||||||||||||||||||||||||||||||.|||||
BSU38730___cy 451 GCGCTCGGCTTCTTCTCTTGGCCGTTTGCCATATTGCTTGCGCTGTATTT 500
BSNT_05929___ 501 GTTTGTTCTTGTTGTATTGTTTCCGGTTGTGTCTTTGCTCGTGACGAGAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 501 GTTTGTTCTTGTTGTATTGTTTCCGGTTGTGTCTTTGCTCGTGACGAGAG 550
BSNT_05929___ 551 CGAAGAATGCGAAGCTGAAAAGCGGGCGGAATGTGCTGTACAGCCGTCTG 600
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU38730___cy 551 CGAAGAATGCGAAGCTGAAAAGCGGACGGAATGTGCTGTACAGCCGTCTG 600
BSNT_05929___ 601 ACAGATGCTGTGATGGGTGTCAGCGACTGGATGTTCAGCGGACGCCGGCA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 601 ACAGATGCTGTGATGGGTGTCAGCGACTGGATGTTCAGCGGACGCCGGCA 650
BSNT_05929___ 651 TGCTTTTATTGATGCTTATGAAAAAGAGGAACATGATTGGTTTGAGCTTG 700
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU38730___cy 651 TGCTTTTATTGATGCTTATGAAAAAGAGGAACGTGATTGGTTTGAGCTTG 700
BSNT_05929___ 701 AACGGAAAAAACAACGCTTTACAAGATGGCGGGATTTTGCTGCGCAATGC 750
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU38730___cy 701 AACGGAAAAAACAACGCTTTACAAGATGGCGGGACTTTGCTGCGCAATGC 750
BSNT_05929___ 751 CTTGTCGCCGGCCTTATTTTGCTGATGCTGTTTTGGACGGCGGGACAGCA 800
||||||||.|||||||||||||||||||||||||||||.|||||||||||
BSU38730___cy 751 CTTGTCGCTGGCCTTATTTTGCTGATGCTGTTTTGGACAGCGGGACAGCA 800
BSNT_05929___ 801 AGCGGACGGCGAGCTCGCTAAAACGATGATTGCCGCTTTTGTGCTAGTGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 801 AGCGGACGGCGAGCTCGCTAAAACGATGATTGCCGCTTTTGTGCTAGTGG 850
BSNT_05929___ 851 TGTTTCCGTTGACGGAAGCCTTTTTGCCGCTTTCGGATGCCTTAGGCGAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 851 TGTTTCCGTTGACGGAAGCCTTTTTGCCGCTTTCGGATGCCTTAGGCGAA 900
BSNT_05929___ 901 GTGCCGGGCTATCAGGATTCTATCAGACGCATGAACAAGGTGGCTCCTCA 950
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU38730___cy 901 GTGCCGGGCTATCAGGATTCTATCAGACGCATGAACAATGTGGCTCCTCA 950
BSNT_05929___ 951 GCTGGAGGCGTCACAAACTGAATCAGGGGATCAAATGCTCGATCTTCAAG 1000
||.|||||||||||||||||||||||||||||||||.|||||||||||||
BSU38730___cy 951 GCCGGAGGCGTCACAAACTGAATCAGGGGATCAAATTCTCGATCTTCAAG 1000
BSNT_05929___ 1001 ATGTCACCTTGGCCTTTCGTGATGTGACGTTTTCTTATGACAACAGCAGC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1001 ATGTCACCTTGGCCTTTCGTGATGTGACGTTTTCTTATGACAACAGCAGC 1050
BSNT_05929___ 1051 CAAGTGCTGCACAACTTTTCCTTTACGCTGCGCCAAGGAGAAAAAATGGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1051 CAAGTGCTGCACAACTTTTCCTTTACGCTGCGCCAAGGAGAAAAAATGGC 1100
BSNT_05929___ 1101 GCTGCTCGGCCGAAGCGGCTCTGGGAAATCAACATCGCTTGCATTAATCG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1101 GCTGCTCGGCCGAAGCGGCTCTGGGAAATCAACATCGCTTGCATTAATCG 1150
BSNT_05929___ 1151 AAGGCGCCTTGAAACCGGACTCCGGTTCTGTGACGTTAAACGGAGTGGAG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1151 AAGGCGCCTTGAAACCGGACTCCGGTTCTGTGACGTTAAACGGAGTGGAG 1200
BSNT_05929___ 1201 ACAGCGCTGTTAAAGGATCAGATTGCGGATGCGGTGGCCGTGTTAAATCA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1201 ACAGCGCTGTTAAAGGATCAGATTGCGGATGCGGTGGCCGTGTTAAATCA 1250
BSNT_05929___ 1251 AAAACCGCACCTGTTTGATACAAGTATTTTGAACAACATCAGGCTCGGAA 1300
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU38730___cy 1251 AAAACCGCACCTGTTTGATACAAGCATTTTGAACAACATCAGGCTCGGAA 1300
BSNT_05929___ 1301 ACGGAGAAGCAAGCGACGAGGATGTGCGCCGCGCCGCAAAGCAGGTCAAG 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1301 ACGGAGAAGCAAGCGACGAGGATGTGCGCCGCGCCGCAAAGCAGGTCAAG 1350
BSNT_05929___ 1351 CTGCATGACTACATTGAGTCATTGCCTGATGGATATCATACCTCTGTACA 1400
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU38730___cy 1351 CTGCATGACTACATTGAGTCATTGCCTGACGGATATCATACCTCTGTACA 1400
BSNT_05929___ 1401 AGAAACCGGCATCCGTTTTTCCGGTGGAGAGCGCCAGCGGATCGCGCTTG 1450
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU38730___cy 1401 AGAAACCGGCATCCGTTTTTCCGGTGGAGAGCGCCAGCGGATCGCACTTG 1450
BSNT_05929___ 1451 CGAGGATTTTGCTGCAGGATACACCGATCATCATCCTCGATGAGCCAACA 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1451 CGAGGATTTTGCTGCAGGATACACCGATCATCATCCTCGATGAGCCAACA 1500
BSNT_05929___ 1501 GTCGGCCTCGATCCTATTACCGAACGTGAATTGATGGAAACGGTGTTTGA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1501 GTCGGCCTCGATCCTATTACCGAACGTGAATTGATGGAAACGGTGTTTGA 1550
BSNT_05929___ 1551 GGTGCTGAAAGGAAAAACGATTTTATGGATTACCCACCATCTCGCGGGAG 1600
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU38730___cy 1551 GGTGCTGAAAGGAAAAACGATTTTATGGATTACACACCATCTCGCGGGAG 1600
BSNT_05929___ 1601 TGGAAGCGGCTGATAAAATCGTATTTCTCGAAAACGGCAAAACAGAAATG 1650
|||||||.||.|||||||||||||||||||||||||||||||||||||||
BSU38730___cy 1601 TGGAAGCAGCCGATAAAATCGTATTTCTCGAAAACGGCAAAACAGAAATG 1650
BSNT_05929___ 1651 GAAGGAACCCATGAGGAGCTTCTGGCGGCAAACGAACGGTACAGCCGCCT 1700
||||||||||||||||||||.|||||||||||||||||.||..|||||||
BSU38730___cy 1651 GAAGGAACCCATGAGGAGCTGCTGGCGGCAAACGAACGATATCGCCGCCT 1700
BSNT_05929___ 1701 GTATCACCTTGATGTTCCTGTAAAATAG 1728
|||||||||||||||||||||||||||.
BSU38730___cy 1701 GTATCACCTTGATGTTCCTGTAAAATAA 1728
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