Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05922 and BSU38700

See Amino acid alignment / Visit BSNT_05922 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:15
# Commandline: needle
#    -asequence dna-align/BSNT_05922___sigY.1.22522.seq
#    -bsequence dna-align/BSU38700___sigY.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05922___sigY-BSU38700___sigY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05922___sigY-BSU38700___sigY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05922___sigY
# 2: BSU38700___sigY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 537
# Identity:     531/537 (98.9%)
# Similarity:   531/537 (98.9%)
# Gaps:           0/537 ( 0.0%)
# Score: 2631.0
# 
#
#=======================================

BSNT_05922___      1 TTGGATACACAAGAAGAACAGCGGCTGATACAGCAGGCGAAAGAGGGAAA     50
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU38700___si      1 TTGGATACACAAGAAGAACAGCGGCTGATCCAGCAGGCGAAAGAGGGAAA     50

BSNT_05922___     51 CGACGAGGCGTTTACAGCCCTTTTCCACTATCACTATTCTTTCTTATATA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38700___si     51 CGACGAGGCGTTTACAGCCCTTTTCCACTATCACTATTCTTTCTTATATA    100

BSNT_05922___    101 AATACTTGTTAAAGCTTTCCCTTCACCCCGATCTCAGCGAGGAACTTGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38700___si    101 AATACTTGTTAAAGCTTTCCCTTCACCCCGATCTCAGCGAGGAACTTGTT    150

BSNT_05922___    151 CAGGAAACCTTTCTGAAAGGGTACATCCATTTAAGAAGCTTTCAGGGCCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38700___si    151 CAGGAAACCTTTCTGAAAGGGTACATCCATTTAAGAAGCTTTCAGGGCCG    200

BSNT_05922___    201 TTCAAAATTCTCCACGTGGCTGATCTCCATTGCATCGCGGCTCTATCTCG    250
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU38700___si    201 TTCAAAATTCTCCACATGGCTGATCTCCATTGCATCGCGGCTCTATCTCG    250

BSNT_05922___    251 ATCACCAGAAAAAGAGAAAGAGAGAATGGAAACGGAATCAGACAGTTACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38700___si    251 ATCACCAGAAAAAGAGAAAGAGAGAATGGAAACGGAATCAGACAGTTACG    300

BSNT_05922___    301 GAGGAAACAATCCGCAAGATCAAGTGGGACGTGTCGGCGAAAGGGGCAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38700___si    301 GAGGAAACAATCCGCAAGATCAAGTGGGACGTGTCGGCGAAAGGGGCAGA    350

BSNT_05922___    351 GTGGAGCGAAACGCTCGATCTGTTTTCAAAGCTGGACCCTAAACTGCGCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38700___si    351 GTGGAGCGAAACGCTCGATCTGTTTTCAAAGCTGGACCCTAAACTGCGCA    400

BSNT_05922___    401 CACCAGTTTTATTAAGGCATTACTACGGCTATACCTACGCCGAAATCGGG    450
                     ||||.|||||||||||||||||||||||||||||||||||.|||||||||
BSU38700___si    401 CACCGGTTTTATTAAGGCATTACTACGGCTATACCTACGCTGAAATCGGG    450

BSNT_05922___    451 ATGATGCTTCAAATCAAAGAAGGCACTGTAAAGTCCAGAGTTCATAAAGG    500
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38700___si    451 GTGATGCTTCAAATCAAAGAAGGCACTGTAAAGTCCAGAGTTCATAAAGG    500

BSNT_05922___    501 GCTCCAGCAAATCAGAAAGGAGTGGGACGATGAATAA    537
                     |||||||||||||||||||||||||||.|||||||||
BSU38700___si    501 GCTCCAGCAAATCAGAAAGGAGTGGGATGATGAATAA    537


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