Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05906 and BSU38600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:14
# Commandline: needle
# -asequence dna-align/BSNT_05906___licR.1.22522.seq
# -bsequence dna-align/BSU38600___licR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05906___licR-BSU38600___licR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05906___licR-BSU38600___licR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05906___licR
# 2: BSU38600___licR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1927
# Identity: 1865/1927 (96.8%)
# Similarity: 1865/1927 (96.8%)
# Gaps: 41/1927 ( 2.1%)
# Score: 9221.0
#
#
#=======================================
BSNT_05906___ 1 ---------------------------------------ATGGCGGCTGA 11
|||||||||||
BSU38600___li 1 ATGCTTCATGGGCGACTACGTGATATTCTGCGCTTGCTGATGGCGGCTGA 50
BSNT_05906___ 12 AGCCCCGGTGACAAGTTCGTTTTTTGCGGCGCAATTAAACGTAACGATGC 61
|||||||||||||||||||||||||||.|||||||||||||||||||.||
BSU38600___li 51 AGCCCCGGTGACAAGTTCGTTTTTTGCCGCGCAATTAAACGTAACGACGC 100
BSNT_05906___ 62 GGACAGCCCGCAATGATATAAAGGAACTTCAAGGTGTGCTAAGCGGCCAC 111
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 101 GGACAGTCCGCAATGATATAAAGGAACTTCAAGGTGTGCTAAGCGGCCAC 150
BSNT_05906___ 112 GGTGCCTTTGTACAATCGGTAAGAGGCTCCGGCTACAAGCTCCGCATTGA 161
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU38600___li 151 GGTGCCTTTGTACAATCTGTAAGAGGCTCCGGCTACAAGCTCCGCATTGA 200
BSNT_05906___ 162 TGACGAGCAAGTATTCAGAACACTGCTGCAAGATGTATTTCAGCAAAAAA 211
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU38600___li 201 TGACGAGCAAGTATTCAGAACACTGCTGCAAGATGAATTTCAGCAAAAAA 250
BSNT_05906___ 212 AGGGCCTGCCGGTATTGCCGGAGGAGAGAATGGCCTATCTTATGAAACGT 261
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 251 AGGGCCTGCCGGTATTGCCGGAGGAGAGAATGGCCTATCTTATGAAACGT 300
BSNT_05906___ 262 CTGCTGCTGGCGGACCATTATCTCAAGCTCGATGAACTTGCTGAAGAACT 311
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 301 CTGCTGCTGGCGGACCATTATCTCAAGCTCGATGAACTTGCTGAAGAACT 350
BSNT_05906___ 312 ATTTATCTCAAAATCTACACTCCAAACGGATTTAAAGGAAGTAAAGAAAC 361
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 351 ATTTATCTCAAAATCTACACTCCAAACGGATTTAAAGGAAGTAAAGAAAC 400
BSNT_05906___ 362 GTCTGCTGCCTTACCGCATCGTCATGGAAACACGTCCGAATTACGGCTTC 411
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 401 GTCTGCTGCCTTACCGCATCGTCATGGAAACACGTCCGAATTACGGCTTC 450
BSNT_05906___ 412 AAGCTGCGCGGGGACGAGGTGCAGATGAGGTACTGCATGGCGGAGTACAT 461
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 451 AAGCTGCGCGGGGACGAGGTGCAGATGAGGTACTGCATGGCGGAGTACAT 500
BSNT_05906___ 462 TGTTGATGAAAGAGAAACGGAGATAGATGTTTTAAATGAAAAGGCTGATA 511
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 501 TGTTGATGAAAGAGAAACGGAGATAGATGTTTTAAATGAAAAGGCTGATA 550
BSNT_05906___ 512 TTTTGCCAAAAGAAGAAATTGAGATCATCCGTTCCGCCATCTTGAAAAAA 561
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 551 TTTTGCCAAAAGAAGAAATTGAGATCATCCGTTCCGCCATCTTGAAAAAA 600
BSNT_05906___ 562 ATGAAAAACGACCGCATCCCTCTGTCCAACATGGGACTGAATAACCTCAT 611
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 601 ATGAAAAACGACCGCATCCCTCTGTCCAACATGGGACTGAATAACCTCAT 650
BSNT_05906___ 612 TATCCATATTGCTATCGCCTGTAAACGGATTAGAACGGAAAACTATGTAT 661
|||||||||.||||||||||||||||||||.|||||||||||||||||.|
BSU38600___li 651 TATCCATATCGCTATCGCCTGTAAACGGATCAGAACGGAAAACTATGTTT 700
BSNT_05906___ 662 CTCTTTTCCCGAAAGATATGGATCATATCCTGCATCAAAAGGAGTACCAG 711
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 701 CTCTTTTCCCGAAAGATATGGATCATATCCTGCATCAAAAGGAGTACCAG 750
BSNT_05906___ 712 GCTGCAGAAGCCATCGTAAAAGAGCTGGAATCAAAGCTTTCCGTTACATT 761
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU38600___li 751 GCTGCAGAAGCCATCGTAAAAGAGCTGGAATCAAAGCTTTCCGTTACGTT 800
BSNT_05906___ 762 TCCGAAAGAAGAGACGGCCTACATCACCATGCATCTCCTTGGCACAAAAC 811
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38600___li 801 TCCGAAAGACGAGACGGCCTACATCACCATGCATCTCCTTGGCACAAAAC 850
BSNT_05906___ 812 GAATGACACAATCACAATGCGGAGAGGACACATTTTCAATAGAAGAGGAA 861
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 851 GAATGACACAATCACAATGCGGAGAGGACACATTTTCAATAGAAGAGGAA 900
BSNT_05906___ 862 ACCGATCAGCTGACACTTGCCATGATCAAAGCTGTTGATCGTGAACTGAA 911
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 901 ACCGATCAGCTGACACTTGCCATGATCAAAGCTGTTGATCGTGAACTGAA 950
BSNT_05906___ 912 GCTTGGCATCCTGCATGACAAAGAGCTGAAAATCGGCTTGGCCCTGCATA 961
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38600___li 951 GCTTGGCATCCTGCATGACAAAGAGCTGAAAATCGGCTTGGCACTGCATA 1000
BSNT_05906___ 962 TGAAGCCGGCGATCAGCCGCAACCGATACGGCATGAATCTTCGAAATCCG 1011
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1001 TGAAGCCGGCGATCAGCCGCAACCGATACGGCATGAATCTTCGAAATCCG 1050
BSNT_05906___ 1012 ATGCTGGCAGCGATCAAGGAACATTATCCACTCGCTTTTGAAGCCGGGAT 1061
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1051 ATGCTGGCAGCGATCAAGGAACATTATCCACTCGCTTTTGAAGCCGGGAT 1100
BSNT_05906___ 1062 CATTGCCGGAATCGTGATAAAGGAACAAACGGGTATTGAGATTCATGAAA 1111
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1101 CATTGCCGGAATCGTGATAAAGGAACAAACGGGTATTGAGATTCATGAAA 1150
BSNT_05906___ 1112 ACGAAATTGGATATTTGGCTCTCCACTTTGGCGCCGCGATTGAACGAAAA 1161
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1151 ACGAAATTGGATATTTGGCTCTCCACTTTGGCGCCGCGATTGAACGAAAA 1200
BSNT_05906___ 1162 AAAACAGAAAGCCCGCCGAAACGCTGTATCATTGTATGCGCATCGGGAGC 1211
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1201 AAAACAGAAAGCCCGCCGAAACGCTGTATCATTGTATGCGCATCGGGAGC 1250
BSNT_05906___ 1212 CGGAAGCGCCCAGCTTCTGCGCGAAAAACTGCGTTCCCATTTCGGCAAGC 1261
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1251 CGGAAGCGCCCAGCTTCTGCGCGAAAAACTGCGTTCCCATTTCGGCAAGC 1300
BSNT_05906___ 1262 GGCTCGATATTCTTGGAACGGCTGAGTATTATAGTCTTGATCAAATGTCC 1311
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1301 GGCTCGATATTCTTGGAACGGCTGAGTATTATAGTCTTGATCAAATGTCC 1350
BSNT_05906___ 1312 TACGAATCAATTGATTTTGTCATCAGTACCATTCCGATTAAAAAAGAGCT 1361
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU38600___li 1351 TACGAATCAATTGATTTTGTCATCAGCACCATTCCGATTAAAAAAGAGCT 1400
BSNT_05906___ 1362 CCCTGTACCAGTACTGAAGGTTAACACCATCTTAGGCGGAACTGACTTTA 1411
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1401 CCCTGTACCAGTACTGAAGGTTAACACCATCTTAGGCGGAACTGACTTTA 1450
BSNT_05906___ 1412 CAAAAATAGAATCTATTCTGAGTGATGAAAAGGAAAAAGCCAATCGCTAC 1461
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1451 CAAAAATAGAATCTATTCTGAGTGATGAAAAGGAAAAAGCCAATCGCTAC 1500
BSNT_05906___ 1462 CTAAAAAAAGAACTCGTTTTTTTTCAGGAGGATCTGCGCTCAAAAGAAGA 1511
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1501 CTAAAAAAAGAACTCGTTTTTTTTCAGGAGGATCTGCGCTCAAAAGAAGA 1550
BSNT_05906___ 1512 AGTGATTCAATTTTTAGGGCAGAAAGCGGTCGAATGCGGCTTTGCCAGA- 1560
||||||||||||||||||||||||||.||||||||||||||||||| ||
BSU38600___li 1551 AGTGATTCAATTTTTAGGGCAGAAAGTGGTCGAATGCGGCTTTGCC-GAT 1599
BSNT_05906___ 1561 GAAGAAATCATAGATTCCATTTTTGAAAGAGAAGACATGTCGCCAACGTG 1610
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1600 GAAGAAATCATAGATTCCATTTTTGAAAGAGAAGACATGTCGCCAACGTG 1649
BSNT_05906___ 1611 TTTTGGCAATCTTGTTGCCATCCCGCACCCGCTTGTTCCGCAGACGAAAA 1660
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1650 TTTTGGCAATCTTGTTGCCATCCCGCACCCGCTTGTTCCGCAGACGAAAA 1699
BSNT_05906___ 1661 CAACGTTTTGGGCTGTTTGTACGCTCAAAAAACCGATCGATTGGGAGAGT 1710
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU38600___li 1700 CAACGTTTTGGGCCGTTTGTACGCTCAAAAAACCGATCGATTGGGAGAGT 1749
BSNT_05906___ 1711 CAGCGAGTTCAATTTGTCTGTTTGCTTTGTGTCGAAAAGGAGAACAAAGC 1760
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU38600___li 1750 CAGCGAGTTCAATTTGTCTGTCTGCTTTGTGTCGAAAAGGAGAACAAAGC 1799
BSNT_05906___ 1761 TGACTTGCAAAGCATGTATAAACTGCTTGGCAGCATTTTGGATGACCCGG 1810
.||.||.|||||||||||||||||||||||||||||||||||||||||||
BSU38600___li 1800 GGATTTACAAAGCATGTATAAACTGCTTGGCAGCATTTTGGATGACCCGG 1849
BSNT_05906___ 1811 CGGCGGTGAACCAGCTGGTCAAATGCCGTTCGTATCAAGAGCTTTCGGAT 1860
|||||.|||||||||||.|||||||||||||.||||||||||||||||||
BSU38600___li 1850 CGGCGATGAACCAGCTGATCAAATGCCGTTCATATCAAGAGCTTTCGGAT 1899
BSNT_05906___ 1861 GTGTTTGACCAAAAAATGCTGAGCTGA 1887
|||||||||||||||||||||||||||
BSU38600___li 1900 GTGTTTGACCAAAAAATGCTGAGCTGA 1926
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