Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05904 and BSU38590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:13
# Commandline: needle
# -asequence dna-align/BSNT_05904.1.22522.seq
# -bsequence dna-align/BSU38590___licB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05904-BSU38590___licB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05904-BSU38590___licB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05904
# 2: BSU38590___licB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity: 249/309 (80.6%)
# Similarity: 249/309 (80.6%)
# Gaps: 57/309 (18.4%)
# Score: 1233.0
#
#
#=======================================
BSNT_05904 0 -------------------------------------------------- 0
BSU38590___li 1 ATGAATATATTACTCGTTTGTGCAGCAGGCATGTCTACTAGCTTACTGGT 50
BSNT_05904 1 -------ATGGAAAAAAGTGCGCAGGAACAGGGAAAAGACTATACCATTT 43
|||||||||||||||||||||||||||||||||||||||||||
BSU38590___li 51 GAGCAAGATGGAAAAAAGTGCGCAGGAACAGGGAAAAGACTATACCATTT 100
BSNT_05904 44 GGGCAGTTTCAGGCGATTCTGTACAAAATCATATCGATAAAGCGGATGTA 93
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38590___li 101 GGGCAGTTTCAGGCGATTCTGTACAAAATCATATCGATAAAGCGGATGTA 150
BSNT_05904 94 TTGCTTCTCGGTCCGCAAGTCCGTTACATGCTTCCGCAGCTCAAAAAATT 143
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38590___li 151 TTGCTTCTCGGTCCGCAAGTCCGTTACATGCTTCCGCAGCTCAAAAAATT 200
BSNT_05904 144 AGGAGAGTCAAAGGGGGTTCCGGTAGATGTCATTAATACCGTCCATTATG 193
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38590___li 201 AGGAGAGTCAAAGGGGGTTCCGGTAGACGTCATTAATACCGTCCATTATG 250
BSNT_05904 194 GCACGTGCAACGGGGCGGAAGTGCTGAAATCAGCTGAACAGCTTGGACAT 243
|.||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38590___li 251 GAACGTGCAATGGGGCGGAAGTGCTGAAATCAGCTGAACAGCTTGGACAT 300
BSNT_05904 244 GTGTCATAG 252
|||||||||
BSU38590___li 301 GTGTCATAG 309
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