Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05901 and BSU38570
See
Amino acid alignment /
Visit
BSNT_05901 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:13
# Commandline: needle
# -asequence dna-align/BSNT_05901___licA.1.22522.seq
# -bsequence dna-align/BSU38570___licA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05901___licA-BSU38570___licA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05901___licA-BSU38570___licA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05901___licA
# 2: BSU38570___licA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 331/333 (99.4%)
# Similarity: 331/333 (99.4%)
# Gaps: 0/333 ( 0.0%)
# Score: 1647.0
#
#
#=======================================
BSNT_05901___ 1 GTGAATGAGGAAATGGAACAAATCATTTTTCAAATCATCCTTCACGGAGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li 1 GTGAATGAGGAAATGGAACAAATCATTTTTCAAATCATCCTTCACGGAGG 50
BSNT_05901___ 51 AAACGGTAGAAGCTCCGCAATGGAGGCCATTGCCGCTGCGAAAAGCGGCG 100
|||||||||.||||||||||||||||||||||||||||||||||||||.|
BSU38570___li 51 AAACGGTAGGAGCTCCGCAATGGAGGCCATTGCCGCTGCGAAAAGCGGTG 100
BSNT_05901___ 101 ACGCAGAAGAAGCGCGGAAAAAGCTTCAAGACGCTGCTGAAGAATTGTCA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li 101 ACGCAGAAGAAGCGCGGAAAAAGCTTCAAGACGCTGCTGAAGAATTGTCA 150
BSNT_05901___ 151 AAAGCCCATCATTATCAGACAGAGCTGATCCAAAATGAAGCGGGCGGAGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li 151 AAAGCCCATCATTATCAGACAGAGCTGATCCAAAATGAAGCGGGCGGAGA 200
BSNT_05901___ 201 AAAGACGGAAATGACGCTTCTGATGGTTCATGCACAGGATCATTTAATGA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li 201 AAAGACGGAAATGACGCTTCTGATGGTTCATGCACAGGATCATTTAATGA 250
BSNT_05901___ 251 ATGCAATGACAGTGAAGGATATGGCTGCAGAGATCATTGAGTTATATGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li 251 ATGCAATGACAGTGAAGGATATGGCTGCAGAGATCATTGAGTTATATGAA 300
BSNT_05901___ 301 AAAATCACCGAGCAAAGGGGAGCAAGCATATGA 333
|||||||||||||||||||||||||||||||||
BSU38570___li 301 AAAATCACCGAGCAAAGGGGAGCAAGCATATGA 333
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.