Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05892 and BSU38510

See Amino acid alignment / Visit BSNT_05892 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:12
# Commandline: needle
#    -asequence dna-align/BSNT_05892___dltB.1.22522.seq
#    -bsequence dna-align/BSU38510___dltB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05892___dltB-BSU38510___dltB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05892___dltB-BSU38510___dltB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05892___dltB
# 2: BSU38510___dltB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1188
# Identity:    1181/1188 (99.4%)
# Similarity:  1181/1188 (99.4%)
# Gaps:           0/1188 ( 0.0%)
# Score: 5877.0
# 
#
#=======================================

BSNT_05892___      1 ATGACGCCTTACAGCTCGTTTTTATTCTTTATACTGCTTGGCATTCTTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl      1 ATGACGCCTTACAGCTCGTTTTTATTCTTTATACTGCTTGGCATTCTTCT     50

BSNT_05892___     51 TCTGCCGACGATCATTCTCGGCTTAAACGGAAAAAGATTTCAAGCATACA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl     51 TCTGCCGACGATCATTCTCGGCTTAAACGGAAAAAGATTTCAAGCATACA    100

BSNT_05892___    101 ACATGTTCATATCTATCATTATATTGGCTTTAATTTTTTCGCACGACTTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    101 ACATGTTCATATCTATCATTATATTGGCTTTAATTTTTTCGCACGACTTA    150

BSNT_05892___    151 CACGGGGTCATCGCGCTGTGCCTGTTTACAATATGGCAGGTGCTCCTGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    151 CACGGGGTCATCGCGCTGTGCCTGTTTACAATATGGCAGGTGCTCCTGAT    200

BSNT_05892___    201 CAGCGGCTATCTGGCATACCGGCAGAAAGCGAACAGCGGCTTTGTCTTTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    201 CAGCGGCTATCTGGCATACCGGCAGAAAGCGAACAGCGGCTTTGTCTTTT    250

BSNT_05892___    251 GCGGGGCTGTTATCGCGTCTATTCTGCCTTTATTTCTGTCAAAAATATGG    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    251 GCGGAGCTGTTATCGCGTCTATTCTGCCTTTATTTCTGTCAAAAATATGG    300

BSNT_05892___    301 CCGTTTCTGTCACACCCGCAGCCGCATCATCCGCCGCATAACCTGATCAG    350
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    301 CCGTTTCTTTCACACCCGCAGCCGCATCATCCGCCGCATAACCTGATCAG    350

BSNT_05892___    351 CTTTTTAGGGATTTCATATTTAACCTTTAAAGGCGTTCAGCTGATTATGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    351 CTTTTTAGGGATTTCATATTTAACCTTTAAAGGCGTTCAGCTGATTATGG    400

BSNT_05892___    401 AAGCAAGAGACGGACTGCTGAAAGAACAGCTGCCATTGCACCGCCTGCTG    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU38510___dl    401 AAGCAAGAGACGGACTGCTGAAAGAACAGCTGCCATTGCACCGTCTGCTG    450

BSNT_05892___    451 TATTTCATCCTGTTTTTCCCGACGATTTCCTCCGGCCCGATCGACAGATA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    451 TATTTCATCCTGTTTTTCCCGACGATTTCCTCCGGCCCGATCGACAGATA    500

BSNT_05892___    501 CCGCCGGTTCGTCAAGGATGAACAGAAGGCTTGGACGAAAGAAGAATACG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    501 CCGCCGGTTCGTCAAGGATGAACAGAAGGCTTGGACGAAAGAAGAATACG    550

BSNT_05892___    551 CCGACCTGTTGTATACGGGAATCCATAAAATCTTCATCGGTTTCCTGTAT    600
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    551 CCGACCTGCTGTATACGGGAATCCATAAAATCTTCATCGGTTTCCTGTAT    600

BSNT_05892___    601 AAATTTATTATCGGCTACGCGATCAATACGTACTTCATCATGAATCTTCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    601 AAATTTATTATCGGCTACGCGATCAATACGTACTTCATCATGAATCTTCC    650

BSNT_05892___    651 CGCAATCACGCACAATAAGATTCTTGGGAACCTGCTGTACATGTACGGCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    651 CGCAATCACGCACAATAAGATTCTTGGGAACCTGCTGTACATGTACGGCT    700

BSNT_05892___    701 ACAGCATGTATTTATTCTTTGATTTCGCCGGCTACACGATGTTTGCCGTC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    701 ACAGCATGTATTTATTCTTTGATTTCGCCGGCTACACGATGTTTGCCGTC    750

BSNT_05892___    751 GGGGTCAGCTACATTATGGGCATTAAATCACCGGAAAACTTTAATAAACC    800
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU38510___dl    751 GGGGTCAGCTACATTATGGGCATTAAATCACCAGAAAACTTTAATAAACC    800

BSNT_05892___    801 ATTTATCAGTAAAAATATTAAAGATTTCTGGAATCGCTGGCATATGTCTC    850
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    801 GTTTATCAGTAAAAATATTAAAGATTTCTGGAATCGCTGGCATATGTCTC    850

BSNT_05892___    851 TGTCATTTTGGTTCAGAGATTATGTGTTTATGAGATTCGTATTTTGGATG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    851 TGTCATTTTGGTTCAGAGATTATGTGTTTATGAGATTCGTATTTTGGATG    900

BSNT_05892___    901 ACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl    901 ACTAAGAAAAAGTGGATCAAAAACCGTATGGCCGTCTCAAACATCGGGTA    950

BSNT_05892___    951 TTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTTGCGCCGCAAT   1000
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU38510___dl    951 TTTCCTGCTGTTTATGCTGATGGGGGTTTGGCACGGGCTCGCGCCGCAAT   1000

BSNT_05892___   1001 ATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl   1001 ATATCATTTACGGCCTCTATCACGCCGTTCTGATGACGTGTTACAACTTT   1050

BSNT_05892___   1051 TTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGAC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl   1051 TTCGAGAAGTGGAATAAGAAATATAAATGGCTGCCGTCCAACCGCTGGAC   1100

BSNT_05892___   1101 AACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGTTTT   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38510___dl   1101 AACCATTCTCGCTATTGTGATCACATTCCATTTCGTTTGCTTCGGGTTTT   1150

BSNT_05892___   1151 ATATTTTCTCAGGAAAACCATTTCATCACCACCATTAA   1188
                     ||||||||||||||||||||||||||||||||||||||
BSU38510___dl   1151 ATATTTTCTCAGGAAAACCATTTCATCACCACCATTAA   1188


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.