Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05884 and BSU38480

See Amino acid alignment / Visit BSNT_05884 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:11
# Commandline: needle
#    -asequence dna-align/BSNT_05884___ywaC.1.22522.seq
#    -bsequence dna-align/BSU38480___ywaC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05884___ywaC-BSU38480___ywaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05884___ywaC-BSU38480___ywaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05884___ywaC
# 2: BSU38480___ywaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 633
# Identity:     629/633 (99.4%)
# Similarity:   629/633 (99.4%)
# Gaps:           0/633 ( 0.0%)
# Score: 3129.0
# 
#
#=======================================

BSNT_05884___      1 ATGGATTTATCTGTAACACATATGGACGATTTAAAAACAGTAATGGAAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38480___yw      1 ATGGATTTATCTGTAACACATATGGACGATTTAAAAACAGTAATGGAAGA     50

BSNT_05884___     51 TTGGAAAAATGAATTATTAGTTTATAAATTTGCGCTAGATGCGCTCGATA    100
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU38480___yw     51 TTGGAAAAATGAGTTATTAGTTTATAAATTTGCGCTAGATGCGCTCGATA    100

BSNT_05884___    101 CAAAGTTCTCAATTATCAGCCAGGAATATAACCTCATTCACGGACACAAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38480___yw    101 CAAAGTTCTCAATTATCAGCCAGGAATATAACCTCATTCACGGACACAAC    150

BSNT_05884___    151 CCGATTGAACATACAAAATCCCGTGTCAAAAGCTTTGAAAGCATCGTGAA    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU38480___yw    151 CCGATTGAACATACAAAATCCCGTGTAAAAAGCTTTGAAAGCATCGTGAA    200

BSNT_05884___    201 TAAGTTAATGAGAAAGGGCTGTGAGATTACGACGAAGGAAATGAAGGAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38480___yw    201 TAAGTTAATGAGAAAGGGCTGTGAGATTACGACGAAGGAAATGAAGGAGC    250

BSNT_05884___    251 ATATTCACGACATTGCCGGCGTGCGCATCATCTGTTCCTTTATTTCTGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38480___yw    251 ATATTCACGACATTGCCGGCGTGCGCATCATCTGTTCCTTTATTTCTGAC    300

BSNT_05884___    301 ATTTATAATGTCGTGAATGTGTTGAAGCAGCATGAAGATTTGAGAATCGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38480___yw    301 ATTTATAATGTCGTGAATGTGTTGAAGCAGCATGAAGATTTGAGAATCGT    350

BSNT_05884___    351 AAAGGTAAAGGATTATATCCAGACACCCAAACCGAATGGCTATCGAAGCC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38480___yw    351 AAAGGTAAAGGATTATATCCAGACACCCAAACCGAATGGCTATCGAAGCC    400

BSNT_05884___    401 TGCATTTAATCATTGAGATGCCTGTGAATTTAACGAACCGTGTGGAATAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38480___yw    401 TGCATTTAATCATTGAGATGCCTGTGAATTTAACGAACCGTGTGGAATAC    450

BSNT_05884___    451 GTCAAAGCAGAAATTCAAATCCGGACAATCGCGATGGATTTCTGGGCGAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38480___yw    451 GTCAAAGCAGAAATTCAAATCCGGACAATCGCGATGGATTTCTGGGCGAG    500

BSNT_05884___    501 CCTTGAACATAAAATTTATTATAAATTGAACAATGACGTTCCTAAGCAAT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38480___yw    501 CCTTGAACATAAAATTTATTATAAATTGAACAATGACGTTCCTAAGCAAT    550

BSNT_05884___    551 TAACAGATGAGCTGAAGGAAGCCGCGGAGATTGCCCATTACCTAGATGAG    600
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU38480___yw    551 TAACAGATGAGCTGAAAGAAGCCGCGGAGATTGCCCATTACCTAGATGAG    600

BSNT_05884___    601 AAAATGCTGGGGATTAAGAAAGAAGTGGATTAG    633
                     ||||||||||||||||||||||||||||||||.
BSU38480___yw    601 AAAATGCTGGGGATTAAGAAAGAAGTGGATTAA    633


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