Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05883 and BSU38470

See Amino acid alignment / Visit BSNT_05883 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:11
# Commandline: needle
#    -asequence dna-align/BSNT_05883___ywaD.1.22522.seq
#    -bsequence dna-align/BSU38470___ywaD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05883___ywaD-BSU38470___ywaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05883___ywaD-BSU38470___ywaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05883___ywaD
# 2: BSU38470___ywaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1368
# Identity:    1343/1368 (98.2%)
# Similarity:  1343/1368 (98.2%)
# Gaps:           0/1368 ( 0.0%)
# Score: 6615.0
# 
#
#=======================================

BSNT_05883___      1 ATGAAAAAGCTTTTGACTGTAATGACGATGGCTGTTTTAACTGCCGGCAC     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU38470___yw      1 ATGAAAAAGCTTTTGACTGTCATGACGATGGCTGTTTTAACTGCCGGCAC     50

BSNT_05883___     51 ACTGCTCTTGCCGGCACAGAGTGTCACCCCTGCCGCACACGCTGTACAAA    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU38470___yw     51 ACTGCTCTTGCCGGCACAGAGTGTCACCCCTGCCGCGCACGCTGTACAAA    100

BSNT_05883___    101 TATCAAATAGCGAGCGCGAGCTTCCATTCAAAGCAAAGCATGCGTACTCT    150
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU38470___yw    101 TATCAAATAGCGAGCGCGAGCTTCCATTCAAAGCAAAACATGCGTACTCT    150

BSNT_05883___    151 ACCATTTCTCAGCTAAGTGAAGCAATCGGCCCCAGAATAGCCGGAACTGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    151 ACCATTTCTCAGCTAAGTGAAGCAATCGGCCCCAGAATAGCCGGAACTGC    200

BSNT_05883___    201 AGCTGAAAAAAAGAGTGCCCTATTGATCGCCTCATCAATGAGAAAATTAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    201 AGCTGAAAAAAAGAGTGCCCTATTGATCGCCTCATCAATGAGAAAATTAA    250

BSNT_05883___    251 AGCTTGATGTGAAGGTTCAACGATTCGACATTCCTGACCGGCTTGAGGGA    300
                     ||||||||||||||||||||||||||.||||||||||||||||||||||.
BSU38470___yw    251 AGCTTGATGTGAAGGTTCAACGATTCAACATTCCTGACCGGCTTGAGGGT    300

BSNT_05883___    301 ACACTGTCTTCAGCAGGACGCGATATTCTTCTCCAAGCGGCGTCCGGCTC    350
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU38470___yw    301 ACACTGTCTTCAGCAGGACGCGATATTCTTCTCCAAGCGGCGTCGGGCTC    350

BSNT_05883___    351 AGCTCCGACTGAGGAACAAGGGCTGACGGCCCCGCTTTACAATGCGGGAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    351 AGCTCCGACTGAGGAACAAGGGCTGACGGCCCCGCTTTACAATGCGGGAT    400

BSNT_05883___    401 TGGGCTATCAAAAGGACTTTACCGCTGACGCCAAGGGCAAAATCGCTTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||.||.
BSU38470___yw    401 TGGGCTATCAAAAGGACTTTACCGCTGACGCCAAGGGCAAAATCGCCTTG    450

BSNT_05883___    451 ATTTCCAGAGGAGACCTGACTTATTACGAGAAAGCCAAAAATGCCGAAGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    451 ATTTCCAGAGGAGACCTGACTTATTACGAGAAAGCCAAAAATGCCGAAGC    500

BSNT_05883___    501 CGCCGGAGCAAAAGCTGTCATCATTTATAACAACAAAGAAAGCCTCGTGC    550
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    501 CGCCGGAGCGAAAGCTGTCATCATTTATAACAACAAAGAAAGCCTCGTGC    550

BSNT_05883___    551 CTATGACGCCAAACCTGTCGGGAAATAAAGTCGGCATTCCGGTCGTCGGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    551 CTATGACGCCAAACCTGTCGGGAAATAAAGTCGGCATTCCGGTCGTCGGC    600

BSNT_05883___    601 ATTAAGAAAGAAGACGGCGAAGCACTTACCCAGCAAAAAGAAGCCACCTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    601 ATTAAGAAAGAAGACGGCGAAGCACTTACCCAGCAAAAAGAAGCCACCTT    650

BSNT_05883___    651 AAAACTAAAAGCATTCACAAACCAAACCTCTCAGAACATCATCGGAATTA    700
                     ||||||||||||||||||||||||||||||.|||||.|||||||||||.|
BSU38470___yw    651 AAAACTAAAAGCATTCACAAACCAAACCTCCCAGAATATCATCGGAATCA    700

BSNT_05883___    701 AAAAACCAAAGAACATCAAACATCCAGACATTGTGTACGTGACGGCCCAT    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU38470___yw    701 AAAAACCAAAGAACATCAAACATCCAGACATTGTGTACGTGACCGCCCAT    750

BSNT_05883___    751 TACGACAGTGTTCCTTTTTCACCCGGAGCAAATGACAACGGCTCAGGAAC    800
                     ||||||||||||||||||||.||||||||||||||||||||||||||.||
BSU38470___yw    751 TACGACAGTGTTCCTTTTTCGCCCGGAGCAAATGACAACGGCTCAGGTAC    800

BSNT_05883___    801 CTCTGTTATGCTGGAGATGGCGCGTGTCTTAAAAAGCGTTCCATCTGATA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    801 CTCTGTTATGCTGGAGATGGCGCGTGTCTTAAAAAGCGTTCCATCTGATA    850

BSNT_05883___    851 AAGAAATCCGCTTTATCGCTTTCGGCGCCGAAGAGCTCGGCCTGCTCGGC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    851 AAGAAATCCGCTTTATCGCTTTCGGCGCCGAAGAGCTCGGCCTGCTCGGC    900

BSNT_05883___    901 TCCTCTCACTATGTAGATCATCTATCGGAAAAAGAGCTGAAACGAAGCGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    901 TCCTCTCACTATGTAGATCATCTATCGGAAAAAGAGCTGAAACGAAGCGA    950

BSNT_05883___    951 AGTGAACTTCAACTTAGATATGGTAGGCACAAGCTGGGAAAAAGCGTCTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw    951 AGTGAACTTCAACTTAGATATGGTAGGCACAAGCTGGGAAAAAGCGTCTG   1000

BSNT_05883___   1001 AGCTGTATGTCAACACATTGGACGGCCAATCTAACTATGTTTGGGAATCC   1050
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU38470___yw   1001 AGCTGTATGTCAACACATTGGATGGCCAATCTAACTATGTTTGGGAATCC   1050

BSNT_05883___   1051 AGCCATACAGCTGCTGAAAAAATTGGGTTTGACAGCCTGTCTCTGACACA   1100
                     ||||.|||.|||||||||||||||||||||||||||||||||||||||||
BSU38470___yw   1051 AGCCGTACGGCTGCTGAAAAAATTGGGTTTGACAGCCTGTCTCTGACACA   1100

BSNT_05883___   1101 GGGAGGATCATCTGATCATGTGCCATTCCACGAAGCCGGCATTGATTCCG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw   1101 GGGAGGATCATCTGATCATGTGCCATTCCACGAAGCCGGCATTGATTCCG   1150

BSNT_05883___   1151 CCAACTTTATTTGGGGAGACCCGGAAACAGAAGAAGTTGAGCCGTGGTAT   1200
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw   1151 CTAACTTTATTTGGGGAGACCCGGAAACAGAAGAAGTTGAGCCGTGGTAT   1200

BSNT_05883___   1201 CATACCCCCGAAGACTCGATCGAACATATCAGCAAAGAACGCCTCCAGCA   1250
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU38470___yw   1201 CATACCCCTGAAGACTCGATCGAACATATCAGCAAAGAACGCCTCCAGCA   1250

BSNT_05883___   1251 AGCAGGCGATCTTGTGACAGCCGCAGTCTATGAGGCTGTGAAAAGAGAGA   1300
                     ||||||||||||||||||||||||.|||||||||||||||||||.|||||
BSU38470___yw   1251 AGCAGGCGATCTTGTGACAGCCGCTGTCTATGAGGCTGTGAAAAAAGAGA   1300

BSNT_05883___   1301 AGAAACCAAAAACCATTAAGAAACAAATGAAGGCCAAAGCAACTGACATT   1350
                     |||||||.||||||||||||||||||||||||||.||||||.||||||||
BSU38470___yw   1301 AGAAACCGAAAACCATTAAGAAACAAATGAAGGCGAAAGCATCTGACATT   1350

BSNT_05883___   1351 TTTGAAGATATCAAATAA   1368
                     ||||||||||||||||||
BSU38470___yw   1351 TTTGAAGATATCAAATAA   1368


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