Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05883 and BSU38470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:11
# Commandline: needle
# -asequence dna-align/BSNT_05883___ywaD.1.22522.seq
# -bsequence dna-align/BSU38470___ywaD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05883___ywaD-BSU38470___ywaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05883___ywaD-BSU38470___ywaD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05883___ywaD
# 2: BSU38470___ywaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1368
# Identity: 1343/1368 (98.2%)
# Similarity: 1343/1368 (98.2%)
# Gaps: 0/1368 ( 0.0%)
# Score: 6615.0
#
#
#=======================================
BSNT_05883___ 1 ATGAAAAAGCTTTTGACTGTAATGACGATGGCTGTTTTAACTGCCGGCAC 50
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU38470___yw 1 ATGAAAAAGCTTTTGACTGTCATGACGATGGCTGTTTTAACTGCCGGCAC 50
BSNT_05883___ 51 ACTGCTCTTGCCGGCACAGAGTGTCACCCCTGCCGCACACGCTGTACAAA 100
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU38470___yw 51 ACTGCTCTTGCCGGCACAGAGTGTCACCCCTGCCGCGCACGCTGTACAAA 100
BSNT_05883___ 101 TATCAAATAGCGAGCGCGAGCTTCCATTCAAAGCAAAGCATGCGTACTCT 150
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU38470___yw 101 TATCAAATAGCGAGCGCGAGCTTCCATTCAAAGCAAAACATGCGTACTCT 150
BSNT_05883___ 151 ACCATTTCTCAGCTAAGTGAAGCAATCGGCCCCAGAATAGCCGGAACTGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 151 ACCATTTCTCAGCTAAGTGAAGCAATCGGCCCCAGAATAGCCGGAACTGC 200
BSNT_05883___ 201 AGCTGAAAAAAAGAGTGCCCTATTGATCGCCTCATCAATGAGAAAATTAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 201 AGCTGAAAAAAAGAGTGCCCTATTGATCGCCTCATCAATGAGAAAATTAA 250
BSNT_05883___ 251 AGCTTGATGTGAAGGTTCAACGATTCGACATTCCTGACCGGCTTGAGGGA 300
||||||||||||||||||||||||||.||||||||||||||||||||||.
BSU38470___yw 251 AGCTTGATGTGAAGGTTCAACGATTCAACATTCCTGACCGGCTTGAGGGT 300
BSNT_05883___ 301 ACACTGTCTTCAGCAGGACGCGATATTCTTCTCCAAGCGGCGTCCGGCTC 350
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU38470___yw 301 ACACTGTCTTCAGCAGGACGCGATATTCTTCTCCAAGCGGCGTCGGGCTC 350
BSNT_05883___ 351 AGCTCCGACTGAGGAACAAGGGCTGACGGCCCCGCTTTACAATGCGGGAT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 351 AGCTCCGACTGAGGAACAAGGGCTGACGGCCCCGCTTTACAATGCGGGAT 400
BSNT_05883___ 401 TGGGCTATCAAAAGGACTTTACCGCTGACGCCAAGGGCAAAATCGCTTTA 450
||||||||||||||||||||||||||||||||||||||||||||||.||.
BSU38470___yw 401 TGGGCTATCAAAAGGACTTTACCGCTGACGCCAAGGGCAAAATCGCCTTG 450
BSNT_05883___ 451 ATTTCCAGAGGAGACCTGACTTATTACGAGAAAGCCAAAAATGCCGAAGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 451 ATTTCCAGAGGAGACCTGACTTATTACGAGAAAGCCAAAAATGCCGAAGC 500
BSNT_05883___ 501 CGCCGGAGCAAAAGCTGTCATCATTTATAACAACAAAGAAAGCCTCGTGC 550
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 501 CGCCGGAGCGAAAGCTGTCATCATTTATAACAACAAAGAAAGCCTCGTGC 550
BSNT_05883___ 551 CTATGACGCCAAACCTGTCGGGAAATAAAGTCGGCATTCCGGTCGTCGGC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 551 CTATGACGCCAAACCTGTCGGGAAATAAAGTCGGCATTCCGGTCGTCGGC 600
BSNT_05883___ 601 ATTAAGAAAGAAGACGGCGAAGCACTTACCCAGCAAAAAGAAGCCACCTT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 601 ATTAAGAAAGAAGACGGCGAAGCACTTACCCAGCAAAAAGAAGCCACCTT 650
BSNT_05883___ 651 AAAACTAAAAGCATTCACAAACCAAACCTCTCAGAACATCATCGGAATTA 700
||||||||||||||||||||||||||||||.|||||.|||||||||||.|
BSU38470___yw 651 AAAACTAAAAGCATTCACAAACCAAACCTCCCAGAATATCATCGGAATCA 700
BSNT_05883___ 701 AAAAACCAAAGAACATCAAACATCCAGACATTGTGTACGTGACGGCCCAT 750
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU38470___yw 701 AAAAACCAAAGAACATCAAACATCCAGACATTGTGTACGTGACCGCCCAT 750
BSNT_05883___ 751 TACGACAGTGTTCCTTTTTCACCCGGAGCAAATGACAACGGCTCAGGAAC 800
||||||||||||||||||||.||||||||||||||||||||||||||.||
BSU38470___yw 751 TACGACAGTGTTCCTTTTTCGCCCGGAGCAAATGACAACGGCTCAGGTAC 800
BSNT_05883___ 801 CTCTGTTATGCTGGAGATGGCGCGTGTCTTAAAAAGCGTTCCATCTGATA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 801 CTCTGTTATGCTGGAGATGGCGCGTGTCTTAAAAAGCGTTCCATCTGATA 850
BSNT_05883___ 851 AAGAAATCCGCTTTATCGCTTTCGGCGCCGAAGAGCTCGGCCTGCTCGGC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 851 AAGAAATCCGCTTTATCGCTTTCGGCGCCGAAGAGCTCGGCCTGCTCGGC 900
BSNT_05883___ 901 TCCTCTCACTATGTAGATCATCTATCGGAAAAAGAGCTGAAACGAAGCGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 901 TCCTCTCACTATGTAGATCATCTATCGGAAAAAGAGCTGAAACGAAGCGA 950
BSNT_05883___ 951 AGTGAACTTCAACTTAGATATGGTAGGCACAAGCTGGGAAAAAGCGTCTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 951 AGTGAACTTCAACTTAGATATGGTAGGCACAAGCTGGGAAAAAGCGTCTG 1000
BSNT_05883___ 1001 AGCTGTATGTCAACACATTGGACGGCCAATCTAACTATGTTTGGGAATCC 1050
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU38470___yw 1001 AGCTGTATGTCAACACATTGGATGGCCAATCTAACTATGTTTGGGAATCC 1050
BSNT_05883___ 1051 AGCCATACAGCTGCTGAAAAAATTGGGTTTGACAGCCTGTCTCTGACACA 1100
||||.|||.|||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 1051 AGCCGTACGGCTGCTGAAAAAATTGGGTTTGACAGCCTGTCTCTGACACA 1100
BSNT_05883___ 1101 GGGAGGATCATCTGATCATGTGCCATTCCACGAAGCCGGCATTGATTCCG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 1101 GGGAGGATCATCTGATCATGTGCCATTCCACGAAGCCGGCATTGATTCCG 1150
BSNT_05883___ 1151 CCAACTTTATTTGGGGAGACCCGGAAACAGAAGAAGTTGAGCCGTGGTAT 1200
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 1151 CTAACTTTATTTGGGGAGACCCGGAAACAGAAGAAGTTGAGCCGTGGTAT 1200
BSNT_05883___ 1201 CATACCCCCGAAGACTCGATCGAACATATCAGCAAAGAACGCCTCCAGCA 1250
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU38470___yw 1201 CATACCCCTGAAGACTCGATCGAACATATCAGCAAAGAACGCCTCCAGCA 1250
BSNT_05883___ 1251 AGCAGGCGATCTTGTGACAGCCGCAGTCTATGAGGCTGTGAAAAGAGAGA 1300
||||||||||||||||||||||||.|||||||||||||||||||.|||||
BSU38470___yw 1251 AGCAGGCGATCTTGTGACAGCCGCTGTCTATGAGGCTGTGAAAAAAGAGA 1300
BSNT_05883___ 1301 AGAAACCAAAAACCATTAAGAAACAAATGAAGGCCAAAGCAACTGACATT 1350
|||||||.||||||||||||||||||||||||||.||||||.||||||||
BSU38470___yw 1301 AGAAACCGAAAACCATTAAGAAACAAATGAAGGCGAAAGCATCTGACATT 1350
BSNT_05883___ 1351 TTTGAAGATATCAAATAA 1368
||||||||||||||||||
BSU38470___yw 1351 TTTGAAGATATCAAATAA 1368
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