Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05877 and BSU38430

See Amino acid alignment / Visit BSNT_05877 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:10
# Commandline: needle
#    -asequence dna-align/BSNT_05877___gspA.1.22522.seq
#    -bsequence dna-align/BSU38430___gspA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05877___gspA-BSU38430___gspA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05877___gspA-BSU38430___gspA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05877___gspA
# 2: BSU38430___gspA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity:     854/861 (99.2%)
# Similarity:   854/861 (99.2%)
# Gaps:           0/861 ( 0.0%)
# Score: 4242.0
# 
#
#=======================================

BSNT_05877___      1 TTGAGGAAAGATGAAATCATGCATATCGTATCATGCGCAGATGATAATTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs      1 TTGAGGAAAGATGAAATCATGCATATCGTATCATGCGCAGATGATAATTA     50

BSNT_05877___     51 TGCTCGTCATTTAGGTGGGATGTTCGTTTCTTTATTGACTAACATGGATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs     51 TGCTCGTCATTTAGGTGGGATGTTCGTTTCTTTATTGACTAACATGGATC    100

BSNT_05877___    101 AGGAGAGAGAGGTAAAATTATACGTCATTGATGGCGGAATTAAGCCTGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs    101 AGGAGAGAGAGGTAAAATTATACGTCATTGATGGCGGAATTAAGCCTGAT    150

BSNT_05877___    151 AACAAAAAAAGACTGGAAGAAACCACTTTGAAATTCGGAGTGCCGATTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs    151 AACAAAAAAAGACTGGAAGAAACCACTTTGAAATTCGGAGTGCCGATTGA    200

BSNT_05877___    201 GTTTTTAGAAGTGGATACCAACATGTATGAACATGCGGTAGAGAGCAGCC    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU38430___gs    201 GTTTTTAGAAGTGGATACCAACATGTATGAACATGCGGTTGAGAGCAGCC    250

BSNT_05877___    251 ATATTACAAAAGCCGCGTATTACCGCATTTCGATTCCCGACTTAATTAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs    251 ATATTACAAAAGCCGCGTATTACCGCATTTCGATTCCCGACTTAATTAAG    300

BSNT_05877___    301 GATGAAAGCATCAAACGAATGATTTACATCGATTGCGATGCGCTTGTCCT    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU38430___gs    301 GATGAAAGCATCAAACGAATGATTTACATCGATTGTGATGCGCTTGTCCT    350

BSNT_05877___    351 AGAGGATATTTCTAAGTTATGGGACTTAGACATTGCGCCTTACACCGTAG    400
                     ||||||||||||||||.||||||||||||||||||||||.||||||||||
BSU38430___gs    351 AGAGGATATTTCTAAGCTATGGGACTTAGACATTGCGCCATACACCGTAG    400

BSNT_05877___    401 CCGCTGTTGAGGATGCGGGGCAGCATGAACGCCTGAAAGAAATGAACGTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs    401 CCGCTGTTGAGGATGCGGGGCAGCATGAACGCCTGAAAGAAATGAACGTC    450

BSNT_05877___    451 ACTGATACAGGGAAGTATTTTAACTCAGGTATCATGATTATTGATTTTGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs    451 ACTGATACAGGGAAGTATTTTAACTCAGGTATCATGATTATTGATTTTGA    500

BSNT_05877___    501 GTCTTGGAGAAATCAAAACATCACAGAAAAAGTCATCAACTTTATCAATG    550
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU38430___gs    501 GTCTTGGAGAAAGCAAAACATCACAGAAAAAGTCATCAACTTTATCAATG    550

BSNT_05877___    551 AACACCCAGACGAAGACTTTCTTGTGCTGCATGACCAAGATGCACTGAAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs    551 AACACCCAGACGAAGACTTTCTTGTGCTGCATGACCAAGATGCACTGAAT    600

BSNT_05877___    601 GCGATCTTGTATGATCAGTGGTATGAACTTCATCCGCGCTGGAACGCTCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs    601 GCGATCTTGTATGATCAGTGGTATGAACTTCATCCGCGCTGGAACGCTCA    650

BSNT_05877___    651 AACCTATATCATGTTAAAGCTGAAAACCCCACCGACTCTGTTAGGGCGGA    700
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38430___gs    651 AACCTATATCATGTTAAAGCTGAAAACCCCATCGACTCTGTTAGGGCGGA    700

BSNT_05877___    701 AGCAATATAATGAAACGAGAGAAAACCCGGCAATCGTGCACTTCTGCGGC    750
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU38430___gs    701 AGCAATATAATGAAACAAGAGAAAACCCGGCAATCGTGCACTTCTGCGGC    750

BSNT_05877___    751 GGAGAAAAGCCTTGGAACTCCAATACAAAACATCCGTATCGCGATGAGTA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs    751 GGAGAAAAGCCTTGGAACTCCAATACAAAACATCCGTATCGCGATGAGTA    800

BSNT_05877___    801 TTTCCATTACATGTCCTATACGAAGTGGAATACGATTGGGAATCCGGCGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38430___gs    801 TTTCCATTACATGTCCTATACGAAGTGGAATACGATTGGGAATCCGGCGA    850

BSNT_05877___    851 TCAACCAATAA    861
                     |||||||||||
BSU38430___gs    851 TCAACCAATAA    861


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05877 and BSU38430

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
