Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05876 and BSU38420

See Amino acid alignment / Visit BSNT_05876 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:10
# Commandline: needle
#    -asequence dna-align/BSNT_05876___sacY.1.22522.seq
#    -bsequence dna-align/BSU38420___sacY.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05876___sacY-BSU38420___sacY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05876___sacY-BSU38420___sacY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05876___sacY
# 2: BSU38420___sacY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 843
# Identity:     838/843 (99.4%)
# Similarity:   838/843 (99.4%)
# Gaps:           0/843 ( 0.0%)
# Score: 4170.0
# 
#
#=======================================

BSNT_05876___      1 ATGAAAATTAAAAGAATCTTAAATCATAATGCTATCGTCGTAAAGGATCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa      1 ATGAAAATTAAAAGAATCTTAAATCATAATGCTATCGTCGTAAAGGATCA     50

BSNT_05876___     51 AAATGAAGAGAAGATTCTCTTGGGTGCAGGAATTGCGTTTAACAAAAAGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa     51 AAATGAAGAGAAGATTCTCTTGGGTGCAGGAATTGCGTTTAACAAAAAGA    100

BSNT_05876___    101 AGAATGATATTGTCGATCCGTCAAAAATAGAAAAAACCTTTATCAGAAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    101 AGAATGATATTGTCGATCCGTCAAAAATAGAAAAAACCTTTATCAGAAAA    150

BSNT_05876___    151 GATACACCTGACTATAAGCAGTTCGAAGAGATTTTAGAAACATTGCCTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    151 GATACACCTGACTATAAGCAGTTCGAAGAGATTTTAGAAACATTGCCTGA    200

BSNT_05876___    201 AGACCACATTCAGATTTCTGAGCAAATTATCTCTCATGCCGAAAAAGAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    201 AGACCACATTCAGATTTCTGAGCAAATTATCTCTCATGCCGAAAAAGAGC    250

BSNT_05876___    251 TGAACATCAAAATCAACGAGCGCATTCATGTCGCTTTTTCAGACCATCTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    251 TGAACATCAAAATCAACGAGCGCATTCATGTCGCTTTTTCAGACCATCTT    300

BSNT_05876___    301 TCTTTTGCGATTGAACGCCTGAGCAATGGGATGGTTATCAAAAATCCGCT    350
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    301 TCTTTTGCAATTGAACGCCTGAGCAATGGGATGGTTATCAAAAATCCGCT    350

BSNT_05876___    351 GCTGAATGAAATCAAAGTCCTTTATCCAAAGGAGTTCCAGATCGGCTTAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    351 GCTGAATGAAATCAAAGTCCTTTATCCAAAGGAGTTCCAGATCGGCTTAT    400

BSNT_05876___    401 GGGCCAGAACACTGATTAAAGATAAACTGGGGATTCACATTCCTGATGAT    450
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    401 GGGCCAGAGCACTGATTAAAGATAAACTGGGGATTCACATTCCTGATGAT    450

BSNT_05876___    451 GAAATCGGCAATATCGCCATGCATATCCACACAGCAAGAAACAATGCCGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    451 GAAATCGGCAATATCGCCATGCATATCCACACAGCAAGAAACAATGCCGG    500

BSNT_05876___    501 CGATATGACACAAACGCTTGATATTACAACAATGATCCGTGATATTATCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    501 CGATATGACACAAACGCTTGATATTACAACAATGATCCGTGATATTATCG    550

BSNT_05876___    551 AGATTATCGAAATTCAACTGTCTATTAATATCGTTGAAGATACCATCTCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    551 AGATTATCGAAATTCAACTGTCTATTAATATCGTTGAAGATACCATCTCT    600

BSNT_05876___    601 TATGAACGGCTTGTGACCCATCTCCGCTTTGCCATTCAGCATATCAAAGC    650
                     ||||||.||||.||||||||||||||||||||||||||||||||||||||
BSU38420___sa    601 TATGAAAGGCTCGTGACCCATCTCCGCTTTGCCATTCAGCATATCAAAGC    650

BSNT_05876___    651 AGGCGAATCCATTTACGAGCTGGACGCAGAAATGATCGACATCATTAAAG    700
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU38420___sa    651 AGGCGAATCCATTTACGAGCTGGACGCAGAAATGATTGACATCATTAAAG    700

BSNT_05876___    701 AGAAGTTTAAGGATGCCTTCCTGTGTGCCCTAAGCATCGGCACCTTTGTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    701 AGAAGTTTAAGGATGCCTTCCTGTGTGCCCTAAGCATCGGCACCTTTGTG    750

BSNT_05876___    751 AAGAAGGAATACGGCTTTGAGTTTCCTGAAAAAGAATTGTGCTACATCGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    751 AAGAAGGAATACGGCTTTGAGTTTCCTGAAAAAGAATTGTGCTACATCGC    800

BSNT_05876___    801 CATGCATATTCAGCGGTTCTACCAACGGTCAGTCGCACGCTGA    843
                     |||||||||||||||||||||||||||||||||||||||||||
BSU38420___sa    801 CATGCATATTCAGCGGTTCTACCAACGGTCAGTCGCACGCTGA    843


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