Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05872 and BSU38400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:10
# Commandline: needle
# -asequence dna-align/BSNT_05872___epr.1.22522.seq
# -bsequence dna-align/BSU38400___epr.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05872___epr-BSU38400___epr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05872___epr-BSU38400___epr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05872___epr
# 2: BSU38400___epr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2059
# Identity: 1915/2059 (93.0%)
# Similarity: 1915/2059 (93.0%)
# Gaps: 122/2059 ( 5.9%)
# Score: 9477.0
#
#
#=======================================
BSNT_05872___ 1 ATGAAAAACATGTCTTGCAAACTTGTTGTATCAGTCACTCTGTTTTTCAG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 1 ATGAAAAACATGTCTTGCAAACTTGTTGTATCAGTCACTCTGTTTTTCAG 50
BSNT_05872___ 51 TTTTCTCACCATAGGCCCTCTCGCTCATGCGCAAAACAGCAGCGAGAAAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 51 TTTTCTCACCATAGGCCCTCTCGCTCATGCGCAAAACAGCAGCGAGAAAG 100
BSNT_05872___ 101 AGGTTATTGTGGTTTATAAAAACAAGGCCGGAAAGGAAACCATCCTGGAC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 101 AGGTTATTGTGGTTTATAAAAACAAGGCCGGAAAGGAAACCATCCTGGAC 150
BSNT_05872___ 151 AGTGATGCTGATGTTGAACAGCAGTATAAACATCTTCCCGCGGTAGCGGT 200
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU38400___ep 151 AGTGATGCTGATGTTGAACAGCAGTATAAGCATCTTCCCGCGGTAGCGGT 200
BSNT_05872___ 201 CACAGCAGACCAGGAGACAGTAAAAGAATTAAAGCAGGATCCTGATATTT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 201 CACAGCAGACCAGGAGACAGTAAAAGAATTAAAGCAGGATCCTGATATTT 250
BSNT_05872___ 251 TGTATGTAGAAAACAACGTATCATTTACCGCAGCAGACAGCACGGATTTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 251 TGTATGTAGAAAACAACGTATCATTTACCGCAGCAGACAGCACGGATTTC 300
BSNT_05872___ 301 AAAGTGCTGTCAGACGGCACTGACACCTCTGACAACTTTGAGCAATGGAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 301 AAAGTGCTGTCAGACGGCACTGACACCTCTGACAACTTTGAGCAATGGAA 350
BSNT_05872___ 351 CCTTGAGCCCATTCAGGTGAAACAGGCTTGGAAGGCAGGACTGACAGGAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 351 CCTTGAGCCCATTCAGGTGAAACAGGCTTGGAAGGCAGGACTGACAGGAA 400
BSNT_05872___ 401 AGAATATCAAAATTGCCGTCATTGACAGCGGGATCTCCCCCCACGATGAC 450
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 401 AAAATATCAAAATTGCCGTCATTGACAGCGGGATCTCCCCCCACGATGAC 450
BSNT_05872___ 451 CTGTCGATTGCCGGCGGGTATTCAGCTGTCAGTTATACCTCTTCTTACAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 451 CTGTCGATTGCCGGCGGGTATTCAGCTGTCAGTTATACCTCTTCTTACAA 500
BSNT_05872___ 501 AGATGATAACGGCCACGGAACACATGTCGCAGGAATTATCGGAGCCAAGC 550
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU38400___ep 501 AGATGATAACGGCCACGGAACACATGTCGCAGGGATTATCGGAGCCAAGC 550
BSNT_05872___ 551 ATAACGGCTACGGAATTGACGGCATCGCACCGGAAGCACAAATATACGCG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 551 ATAACGGCTACGGAATTGACGGCATCGCACCGGAAGCACAAATATACGCG 600
BSNT_05872___ 601 GTTAAAGCGCTTGATCAGAACGGCTCGGGGGATCTTCAAAGTCTTCTCCA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 601 GTTAAAGCGCTTGATCAGAACGGCTCGGGGGATCTTCAAAGTCTTCTCCA 650
BSNT_05872___ 651 AGGAATTGACTGGTCGATCGCAAACGGGATGGACATCGTCAATATGAGCC 700
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU38400___ep 651 AGGAATTGACTGGTCGATCGCAAACAGGATGGACATCGTCAATATGAGCC 700
BSNT_05872___ 701 TTGGCACGACGTCAGACAGCAAAATCCTTCATGACGCCGTGAACAAAGCA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 701 TTGGCACGACGTCAGACAGCAAAATCCTTCATGACGCCGTGAACAAAGCA 750
BSNT_05872___ 751 TATGAACAAGGTGTTCTGCTTGTTGCCGCAAGCGGTAACGACGGAAACGG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 751 TATGAACAAGGTGTTCTGCTTGTTGCCGCAAGCGGTAACGACGGAAACGG 800
BSNT_05872___ 801 CAAGCCAGTGAATTATCCGGCGGCATACAGCAGTGTCGTTGCGGTTTCAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 801 CAAGCCAGTGAATTATCCGGCGGCATACAGCAGTGTCGTTGCGGTTTCAG 850
BSNT_05872___ 851 CAACAAACGAAAAGAATCAGCTTGCCTCCTTCTCAACAACTGGAGATGAA 900
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38400___ep 851 CAACAAACGAAAAGAATCAGCTTGCCTCCTTTTCAACAACTGGAGATGAA 900
BSNT_05872___ 901 GTTGAATTTTCAGCACCGGGGACAAACATCACAAGCACTTACTTAAACCA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 901 GTTGAATTTTCAGCACCGGGGACAAACATCACAAGCACTTACTTAAACCA 950
BSNT_05872___ 951 GTATTATGCAACGGGAAGCGGAACATCCCAAGCGACACCGCACGCCGCTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 951 GTATTATGCAACGGGAAGCGGAACATCCCAAGCGACACCGCACGCCGCTG 1000
BSNT_05872___ 1001 CCATGTTTGCCTTGTTAAAACAGCGTGATCCTGCCGAGACAAACGTCCAG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 1001 CCATGTTTGCCTTGTTAAAACAGCGTGATCCTGCCGAGACAAACGTCCAG 1050
BSNT_05872___ 1051 CTTCGCGAGGAAATGCGGAGAAATATCGTTGATCTTGGTACCGCAGGCCG 1100
|||||||||||||||||||.|||.||||||||||||||||||||||||||
BSU38400___ep 1051 CTTCGCGAGGAAATGCGGAAAAACATCGTTGATCTTGGTACCGCAGGCCG 1100
BSNT_05872___ 1101 CGATCAGCAATTTGGCTACGGCTTAATCCAATATAAAGCACAGGCAACAG 1150
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU38400___ep 1101 CGATCAGCAATTTGGCTACGGCTTAATCCAGTATAAAGCACAGGCAACAG 1150
BSNT_05872___ 1151 ATTCAGCGTACGCGGCAGCAGAGCAAGCGGTGAAAAAAGCGGAACAAACA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 1151 ATTCAGCGTACGCGGCAGCAGAGCAAGCGGTGAAAAAAGCGGAACAAACA 1200
BSNT_05872___ 1201 AAAGCACAAACCGATATCAACAAAGCGCAAGAACTCGTCAGCCAGCTGCC 1250
||||||||||.|||||||||||||||||.|||||||.|||||||||||||
BSU38400___ep 1201 AAAGCACAAATCGATATCAACAAAGCGCGAGAACTCATCAGCCAGCTGCC 1250
BSNT_05872___ 1251 GGGCTCCGACGCCAAAACTGCCCTGCAAAAAAGACTGGATAAAGTACAGT 1300
|..||||||||||||||||||||||||.||||||||||||||||||||||
BSU38400___ep 1251 GAACTCCGACGCCAAAACTGCCCTGCACAAAAGACTGGATAAAGTACAGT 1300
BSNT_05872___ 1301 CATACAGAAATGTAAAAGATGCGAAAGACAAAGTCGCAAATGCAGAAAAA 1350
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU38400___ep 1301 CATACAGAAATGTAAAAGATGCGAAAGACAAAGTCGCAAAGGCAGAAAAA 1350
BSNT_05872___ 1351 TATAAAACACAGCAAACCGTTGATACAGCACAAACCGCCATCAACAAGCT 1400
|||||||||||||||||||||||.|||||||||||.||||||||||||||
BSU38400___ep 1351 TATAAAACACAGCAAACCGTTGACACAGCACAAACTGCCATCAACAAGCT 1400
BSNT_05872___ 1401 GCCAAACGGAACAGACAAAAAGAACCTGCAAAAACGCTTAGACCAAGTAA 1450
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38400___ep 1401 GCCAAACGGAACAGACAAAAAGAACCTTCAAAAACGCTTAGACCAAGTAA 1450
BSNT_05872___ 1451 AACGCTACATCGCGTCAAAGCAAGCGAAAGACAAAGTTGCGAAAGCGGAA 1500
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 1451 AACGATACATCGCGTCAAAGCAAGCGAAAGACAAAGTTGCGAAAGCGGAA 1500
BSNT_05872___ 1501 AAAAGCAAAAAGAAAACAGATGTGGACAGCGCACAATCAGCAATTGGCAA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 1501 AAAAGCAAAAAGAAAACAGATGTGGACAGCGCACAATCAGCAATTGGCAA 1550
BSNT_05872___ 1551 GCTGCCTGCAAGTTCAGAAAAAACGTCCCTGCAGAAACGCCTTAACAAAG 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 1551 GCTGCCTGCAAGTTCAGAAAAAACGTCCCTGCAGAAACGCCTTAACAAAG 1600
BSNT_05872___ 1601 TGAAGAGCACCAATTTGAAGACGGCACAGCAATCCGTATCTGCGGCTGAA 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 1601 TGAAGAGCACCAATTTGAAGACGGCACAGCAATCCGTATCTGCGGCTGAA 1650
BSNT_05872___ 1651 AAGAAATCAACTGATGCAAATGCGGCAAAAGCACAATCAGCCGTCAATCA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 1651 AAGAAATCAACTGATGCAAATGCGGCAAAAGCACAATCAGCCGTCAATCA 1700
BSNT_05872___ 1701 GCTTCAAGCAGGCAAGGACAAAACAGCATTGCAAAAACGGTTAGACAAAG 1750
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU38400___ep 1701 GCTTCAAGCAGGCAAGGACAAAACGGCATTGCAAAAACGGTTAGACAAAG 1750
BSNT_05872___ 1751 TGAAGAAAAAGGTGGCGGCGGCTGAAGCAAAAAAAGTGGAAACTGCCAAG 1800
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38400___ep 1751 TGAAGAAAAAGGTGGCGGCGGCTGAAGCAAAAAAAGTGGAAACTGCAAAG 1800
BSNT_05872___ 1801 GCAAAAGTGAAGAAAGCGGAAAAAGACAAAACAAAGAAATCAAAGGCATC 1850
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU38400___ep 1801 GCAAAAGTGAAGAAAGCGGAAAAAGACAAAACAAAGAAATCAAAGACATC 1850
BSNT_05872___ 1851 CGCTCAGTCTGCAGTGAATCAATTAAAAGCATCCAATGAAAAAACAAAGC 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38400___ep 1851 CGCTCAGTCTGCAGTGAATCAATTAAAAGCATCCAATGAAAAAACAAAGC 1900
BSNT_05872___ 1901 TGCAAAAACGGCTGAACGCCGTCAAACCG-AAAAGTAACCAAAAACCTTT 1949
||||||||||||||||||||||||||||| ||||||||
BSU38400___ep 1901 TGCAAAAACGGCTGAACGCCGTCAAACCGAAAAAGTAA------------ 1938
BSNT_05872___ 1950 AAGACTTGCATTCCAGGTCTTAAAGGTTTTTTACATTCTAAGAACATCAC 1999
BSU38400___ep 1938 -------------------------------------------------- 1938
BSNT_05872___ 2000 ACACAACCTTTTTCCCATCCATTGTACAGGCTTTTCATACTATTGCTATA 2049
BSU38400___ep 1938 -------------------------------------------------- 1938
BSNT_05872___ 2050 CAGCCATGA 2058
BSU38400___ep 1938 --------- 1938
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