Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05867 and BSU38380

See Amino acid alignment / Visit BSNT_05867 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:09
# Commandline: needle
#    -asequence dna-align/BSNT_05867___ywbB.1.22522.seq
#    -bsequence dna-align/BSU38380___ywbB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05867___ywbB-BSU38380___ywbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05867___ywbB-BSU38380___ywbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05867___ywbB
# 2: BSU38380___ywbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 678
# Identity:     671/678 (99.0%)
# Similarity:   671/678 (99.0%)
# Gaps:           0/678 ( 0.0%)
# Score: 3327.0
# 
#
#=======================================

BSNT_05867___      1 ATGCTAGATTATATATGGTTAGATGACGAATCACCAATCTTACAACAAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38380___yw      1 ATGCTAGATTATATATGGTTAGATGACGAATCACCAATCTTACAACAAGT     50

BSNT_05867___     51 ACCAGTTGAATACTCATCTGCTGCACTTATCTTTTCTCCTTTTATCCAAA    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU38380___yw     51 ACCAGTTGAATACTCATCTGCTGCTCTTATCTTTTCTCCTTTTATCCAAA    100

BSNT_05867___    101 TGCCTGAAGGATGGGAGAATGCAAAAAGAAAAAATGATTACGAGCATATT    150
                     ||||||||||||||||||||||||||||||||||||||||.||.||||||
BSU38380___yw    101 TGCCTGAAGGATGGGAGAATGCAAAAAGAAAAAATGATTATGAACATATT    150

BSNT_05867___    151 TATCCAAACGATGATGAAATAAGAGGAATAGGCAAGGCTGTTTCCTGGAA    200
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU38380___yw    151 TATCCAAACGATAATGAAATAAGAGGAATAGGCAAGGCTGTTTCCTGGAA    200

BSNT_05867___    201 GAAGGTTATGTCTTCTTGCGGCTTTCAAACACATGCTGAGCTGGCGCTGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38380___yw    201 GAAGGTTATGTCTTCTTGCGGCTTTCAAACACATGCTGAGCTGGCGCTGG    250

BSNT_05867___    251 CTTTAATGACGTCGATAGGTGCTTTAAGGGACGAGTTCGCGAGAGAGGAT    300
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU38380___yw    251 CTTTAATGACGTCGATAGGCGCTTTAAGGGACGAGTTCGCGAGAGAGGAT    300

BSNT_05867___    301 TTGGCTGAGGTGTTACATGAAAACATAAATGGAGACCTCTATTATCCCAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38380___yw    301 TTGGCTGAGGTGTTACATGAAAACATAAATGGAGACCTCTATTATCCCAG    350

BSNT_05867___    351 TGAGGATCATATTTCAAATTTTCATATTCCGAGTTTGGTAAAGGTATTAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38380___yw    351 TGAGGATCATATTTCAAATTTTCATATTCCGAGTTTGGTAAAGGTATTAG    400

BSNT_05867___    401 GTGCGAACGGATCCAATCGGTTTTATTACGCAGAACCGATTGTGGAAAAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38380___yw    401 GTGCGAACGGATCCAATCGGTTTTATTACGCAGAACCGATTGTGGAAAAC    450

BSNT_05867___    451 CGCGGCGTTTTGGACATAACTGAGGCCAACTTGCGGACGGTTCTTGATGA    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU38380___yw    451 CGCGGCGTTTTGGACATAACTGAAGCCAACTTGCGGACGGTTCTTGATGA    500

BSNT_05867___    501 AGCCGCAGCAGAGCTCGTTTTAACTGATGAGAAAATGGATTTTGTGTTTA    550
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU38380___yw    501 AGCCGCAACAGAGCTCGTTTTAACTGATGAGAAAATGGATTTTGTGTTTA    550

BSNT_05867___    551 TGAGTGTATATGACTCATTCATTAATGTCTTTTTAGCCAAAGATAAAAAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38380___yw    551 TGAGTGTATATGACTCATTCATTAATGTCTTTTTAGCCAAAGATAAAAAC    600

BSNT_05867___    601 ATCCATGAATTGGTTGAGCGTATGGGCTGGGAAGCTATGATTTGCGATGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38380___yw    601 ATCCATGAATTGGTTGAGCGTATGGGCTGGGAAGCTATGATTTGCGATGA    650

BSNT_05867___    651 GTCAACGTATATCAGTTGGTATAGATAA    678
                     ||||||||||||||||||||||||||||
BSU38380___yw    651 GTCAACGTATATCAGTTGGTATAGATAA    678


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