Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05864 and BSU38360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence dna-align/BSNT_05864___ywbD.1.22522.seq
# -bsequence dna-align/BSU38360___ywbD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05864___ywbD-BSU38360___ywbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05864___ywbD-BSU38360___ywbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05864___ywbD
# 2: BSU38360___ywbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1191
# Identity: 1150/1191 (96.6%)
# Similarity: 1150/1191 (96.6%)
# Gaps: 3/1191 ( 0.3%)
# Score: 5587.0
#
#
#=======================================
BSNT_05864___ 1 ATGAAGCTACTCACCCTAAAGAAAGCACACGCTGCCAAAATCAAAAAAGG 50
||||||||||||||||||||.||||||||||||||||||||.||||||||
BSU38360___yw 1 ATGAAGCTACTCACCCTAAAAAAAGCACACGCTGCCAAAATAAAAAAAGG 50
BSNT_05864___ 51 CTATCCCCTTATCGAAAAAGAAGCTCTCGCAGGGAGTGCGGGGCACATGA 100
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU38360___yw 51 CTATCCCCTTATTGAAAAAGAAGCTCTCGCAGGGAGTGCGGGGCACATGA 100
BSNT_05864___ 101 AAGAAGGAGACATCGTTGATATCGTGTCTGAGA---GCGGCGAGTTTCTC 147
|||||||||||.||||||||||||||||||||| ||||||||||||||
BSU38360___yw 101 AAGAAGGAGACCTCGTTGATATCGTGTCTGAGAGCGGCGGCGAGTTTCTC 150
BSNT_05864___ 148 GCGCGGGGCTATTACGGCCTGCAAAATAAAGGGGTCGGCTGGACGCTTAC 197
||||||||||||||||||||||||||.||||||||.||||||||||||||
BSU38360___yw 151 GCGCGGGGCTATTACGGCCTGCAAAACAAAGGGGTTGGCTGGACGCTTAC 200
BSNT_05864___ 198 CCGCAATAAACATGAACAGATTGACCAGGCATTTTTTCTCACCAAATTAA 247
|||||||||||||||||||||||||||.|||||||||||||.||||||||
BSU38360___yw 201 CCGCAATAAACATGAACAGATTGACCAAGCATTTTTTCTCAGCAAATTAA 250
BSNT_05864___ 248 CAAAAGCGGCCCAAGCGCGCGCCAAACTATTTGAGGCTCAAGATACAACG 297
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU38360___yw 251 CAAAAGCGGCCCAAGCGCGCGCCAAACTATTTGAGGCTCAAGATACAACA 300
BSNT_05864___ 298 GCTTTCCGCCTGTTTAACGGTGAGGGCGACGGTGTCGGCGGCGTCACCAT 347
||||||||||||||.|||||||||||.|||||||||||||||||||||||
BSU38360___yw 301 GCTTTCCGCCTGTTCAACGGTGAGGGTGACGGTGTCGGCGGCGTCACCAT 350
BSNT_05864___ 348 CGACTATTATGACGGCTACCTGCTGGTACAATGGTACAGCAAGGGCATTT 397
|||||||||||||||||||||||||.|.|||||||||||||||||.||||
BSU38360___yw 351 CGACTATTATGACGGCTACCTGCTGATTCAATGGTACAGCAAGGGAATTT 400
BSNT_05864___ 398 ACACCTTTAAAGATATGCTAATTTCCGCTTTGGATGAGATGGATCTTGAT 447
|||||||||||||.|||||.||||||||.|||||||||||||||||||||
BSU38360___yw 401 ACACCTTTAAAGACATGCTGATTTCCGCATTGGATGAGATGGATCTTGAT 450
BSNT_05864___ 448 TATAAAGCGATTTACGAGAAAAAACGCTTCGACACAGCTGGACAATACGT 497
||||||||||||||||||||.||||||||||||||.||||||||||||||
BSU38360___yw 451 TATAAAGCGATTTACGAGAAGAAACGCTTCGACACGGCTGGACAATACGT 500
BSNT_05864___ 498 TGAAGATGATGACTTCGTGAAAGGGAAAAGAGGCGAGTTCCCGATCATCA 547
||||||||||||||||||||||||||.|||.|||||||||||||||||||
BSU38360___yw 501 TGAAGATGATGACTTCGTGAAAGGGAGAAGGGGCGAGTTCCCGATCATCA 550
BSNT_05864___ 548 TCCAGGAGAATGGCATTCAATACGCGGTGGATTTGAATGAAGGCGCCATG 597
||||.|||||||||||||||||||||||||||.|||||||||||||||||
BSU38360___yw 551 TCCAAGAGAATGGCATTCAATACGCGGTGGATCTGAATGAAGGCGCCATG 600
BSNT_05864___ 598 ACGGGCATCTTTTTGGATCAGAGACATGTGCGCAAGGCGATCAGAGACCG 647
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38360___yw 601 ACGGGCATCTTTTTGGATCAGAGACATGTGCGCAAGGCGATCAGAGACCG 650
BSNT_05864___ 648 CTATGCAAAAGGGAAAACCGTTTTAAATACATTTTCTTATACGGGTGCAT 697
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU38360___yw 651 CTATGCAAAAGGGAAAACCGTTTTAAATACGTTTTCTTATACGGGTGCAT 700
BSNT_05864___ 698 TCTCCGTGGCAGCGGCGCTTGGCGGAGCGGAGAAAACAACAAGCGTCGAC 747
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38360___yw 701 TCTCCGTGGCGGCGGCGCTTGGCGGAGCGGAGAAAACAACAAGCGTCGAC 750
BSNT_05864___ 748 GTGGCAAACCGAAGTCTGGCCAAAACGATCGAGCAATTCAGCGTGAACAA 797
||||||||.||||||||.||||||||||||||||||||||||||||||||
BSU38360___yw 751 GTGGCAAATCGAAGTCTTGCCAAAACGATCGAGCAATTCAGCGTGAACAA 800
BSNT_05864___ 798 GCTGGATTACGAAGCGCACGACATTAAAGTGATGGACGTTTTTAATTATT 847
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU38360___yw 801 GCTGGATTACGAAGCGCACGACATTAAAGTGATGGACGTTTTTAACTATT 850
BSNT_05864___ 848 TTTCATATGCTGAAAAAAAGGATTTGCGCTTTGATCTGATTATTCTCGAT 897
||||||||||||.|||||||||||||||||||||||||||||||||.|||
BSU38360___yw 851 TTTCATATGCTGCAAAAAAGGATTTGCGCTTTGATCTGATTATTCTAGAT 900
BSNT_05864___ 898 CCGCCTTCCTTTGCGCGCACAAAAAAACGCACCTTCAGCGCGGCCAAGGA 947
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38360___yw 901 CCGCCTTCCTTTGCGCGCACAAAAAAACGCACCTTCAGCGCGGCCAAGGA 950
BSNT_05864___ 948 TTATAAAAACCTGCTGAAGGAAACGATCGCCATCACTGCTGACAAGGGTG 997
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38360___yw 951 TTATAAAAACCTGCTGAAGGAAACGATCGCCATCACTGCTGACAAGGGTG 1000
BSNT_05864___ 998 TCATTGTTGCCTCTACAAACAGCAGCGCATTTGGCATGAAGAAATTCAAA 1047
||||||||||||||||||||||||||||.||||||||||||||.||||||
BSU38360___yw 1001 TCATTGTTGCCTCTACAAACAGCAGCGCCTTTGGCATGAAGAAGTTCAAA 1050
BSNT_05864___ 1048 GGCTTTATCGATGCCGCATTTAAAGAAACAAACGAACGCTACACCATCAT 1097
||||||||.||||||||.||||||||||||||.|||||||||||.|||||
BSU38360___yw 1051 GGCTTTATTGATGCCGCCTTTAAAGAAACAAATGAACGCTACACGATCAT 1100
BSNT_05864___ 1098 TGAGGAATTTACGCTGCCGAAGGATTTCAAAACGATTTCGGCATTTCCGG 1147
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU38360___yw 1101 TGAGGAATTTACGCTGCCGGAGGATTTCAAAACGATTTCGGCATTTCCGG 1150
BSNT_05864___ 1148 AAGGCAACTACCTGAAAGTGGTCCTTCTGCAGAAAAAGTAA 1188
|||||||||||||||||||||||||||||||||||||.|||
BSU38360___yw 1151 AAGGCAACTACCTGAAAGTGGTCCTTCTGCAGAAAAAATAA 1191
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