Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05862 and BSU38340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:08
# Commandline: needle
# -asequence dna-align/BSNT_05862___ywbF.1.22522.seq
# -bsequence dna-align/BSU38340___ywbF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05862___ywbF-BSU38340___ywbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05862___ywbF-BSU38340___ywbF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05862___ywbF
# 2: BSU38340___ywbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1203
# Identity: 1180/1203 (98.1%)
# Similarity: 1180/1203 (98.1%)
# Gaps: 3/1203 ( 0.2%)
# Score: 5809.0
#
#
#=======================================
BSNT_05862___ 1 ATGCACAACTTGCAGGTGAGGCGGTATTACGCCGCGTTAAAAGGATTTTA 50
||||||||||||||||||||||||.||||.||||||||||||||||||||
BSU38340___yw 1 ATGCACAACTTGCAGGTGAGGCGGCATTATGCCGCGTTAAAAGGATTTTA 50
BSNT_05862___ 51 TTTGTTTGCTTTTCTCGGTACGGGCAGCATAATTCCCTTACTCAGTATGT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 51 TTTGTTTGCTTTTCTCGGTACGGGCAGCATAATTCCCTTACTCAGTATGT 100
BSNT_05862___ 101 ATTTAACGAAGGAACAGCATTTAAGCGGATCACAGGTCGGCTTGATCATG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 101 ATTTAACGAAGGAACAGCATTTAAGCGGATCACAGGTCGGCTTGATCATG 150
BSNT_05862___ 151 TCACTGGGCCCGATTGTGATGATTTTCTTTCAGCCGTTTTGGGGCATGCT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 151 TCACTGGGCCCGATTGTGATGATTTTCTTTCAGCCGTTTTGGGGCATGCT 200
BSNT_05862___ 201 GAGCGACTATACGCAAAAAACGAAAGGCCTGCTGGCGGTTTGCACATCAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 201 GAGCGACTATACGCAAAAAACGAAAGGCCTGCTGGCGGTTTGCACATCAA 250
BSNT_05862___ 251 TCACAGGCATCATTGGATTAGCCTATATTGCATTTGACGGTTTCCCTCTG 300
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU38340___yw 251 TCACAGGCATCATTGGATTAGCCTATATTGCATTTGACAGTTTCCCTCTG 300
BSNT_05862___ 301 TTTATTTTGATTGCGGCCTGTTTTGCAGCCTTTCAAAGCACGATTATTCC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 301 TTTATTTTGATTGCGGCCTGTTTTGCAGCCTTTCAAAGCACGATTATTCC 350
BSNT_05862___ 351 ACTTTCGGACAGCATTTCACTAAGGTACACACAAGAAACAAACGGCAACT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 351 ACTTTCGGACAGCATTTCACTAAGGTACACACAAGAAACAAACGGCAACT 400
BSNT_05862___ 401 ACGGCGGAATCCGCCTGTTTGGTTCTCTCGGCTTCGGCGTCGCGGTGTTT 450
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU38340___yw 401 ACGGCGGAATCCGCCTGTTTGGTTCTCTCGGCTTCGGTGTCGCGGTGTTT 450
BSNT_05862___ 451 GCCATGGGACAGGTGACGAACCAGCTGTACCCCATTCACGTGATCTTTAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 451 GCCATGGGACAGGTGACGAACCAGCTGTACCCCATTCACGTGATCTTTAT 500
BSNT_05862___ 501 CTTTGGCTGTGCCTTTCTGTGCATTGCCGCCATATTGGCTTCTCAAATGC 550
|||||||||||||||||||||||||||.||||||||||||||.|||.|||
BSU38340___yw 501 CTTTGGCTGTGCCTTTCTGTGCATTGCTGCCATATTGGCTTCACAAGTGC 550
BSNT_05862___ 551 CGGGCCAGCAGAAAACGAAAACAAAGGTCAATATCCGCAAAGGATTCCGG 600
|.|||||||||||||| |||||||||||||||||||||||||||||||
BSU38340___yw 551 CCGGCCAGCAGAAAAC---AACAAAGGTCAATATCCGCAAAGGATTCCGG 597
BSNT_05862___ 601 GAGCTTATCAGCAACAAAACCTTCCTCATCTTTATGATCATCACCTTTAC 650
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU38340___yw 598 GAGCTTATCAGCAACAAAACTTTCCTCATCTTTATGATCATCACCTTTAC 647
BSNT_05862___ 651 GACATTTGCTCCAAACTTAGCGAACAATACGTATTTCAGTCTTTTTCTGG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 648 GACATTTGCTCCAAACTTAGCGAACAATACGTATTTCAGTCTTTTTCTGG 697
BSNT_05862___ 701 ACAAAAGCGGCGCGTCTCTTTCCGCTATCGGCATTTTATTTTTCATCGGC 750
||||||||||||||||.||||||||||||||||||||||||||||||||.
BSU38340___yw 698 ACAAAAGCGGCGCGTCACTTTCCGCTATCGGCATTTTATTTTTCATCGGT 747
BSNT_05862___ 751 GTGATTTCAGAAATACCATTTATGCGGTTTGCCCAAACATTTATAGATAA 800
||.|||||||||||.|||||||||.|.||.||||||||||||||||||||
BSU38340___yw 748 GTCATTTCAGAAATTCCATTTATGAGATTCGCCCAAACATTTATAGATAA 797
BSNT_05862___ 801 AATGGGGCTGCTCAACGTCATTATGCTGTCAGGCGGAGTCTCATTATTCA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 798 AATGGGGCTGCTCAACGTCATTATGCTGTCAGGCGGAGTCTCATTATTCA 847
BSNT_05862___ 851 GGTGGGCGCTCTATTTCACGGCGCCTTCACTATGGATCATATATGTGACG 900
||||||||||||||||||||||||||||||||||||||||.||||.||||
BSU38340___yw 848 GGTGGGCGCTCTATTTCACGGCGCCTTCACTATGGATCATTTATGCGACG 897
BSNT_05862___ 901 GTCTTTCTTCAGGGAGTGGCCATCGGTTTATTTATCCCGGCGGCGCTTCA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 898 GTCTTTCTTCAGGGAGTGGCCATCGGTTTATTTATCCCGGCGGCGCTTCA 947
BSNT_05862___ 951 ATATGTGAAAAAGATTACCCCAAGACACGTTGAAGCGACGGCACTGACCA 1000
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38340___yw 948 ATATGTGAAAAAGATTACCCCAAGACACGTTGAAGCGACGGCGCTGACCA 997
BSNT_05862___ 1001 TGTACGCCGCCATCGGCAACGGGTTCGGCAACTGGTTCTGCACATTTGCA 1050
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU38340___yw 998 TGTACGCCGCCATTGGCAACGGGTTCGGCAACTGGTTCTGCACATTTGCA 1047
BSNT_05862___ 1051 GGCGGGTACATTTTTGACTACGTGTCGATCTTCGCAGTCTACTTGCTTTT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 1048 GGCGGGTACATTTTTGACTACGTGTCGATCTTCGCAGTCTACTTGCTTTT 1097
BSNT_05862___ 1101 TGGCATTCTGAGCATAGCAGGCTTTGGCCTGACATTATATTTAATGAAGG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 1098 TGGCATTCTGAGCATAGCAGGCTTTGGCCTGACATTATATTTAATGAAGG 1147
BSNT_05862___ 1151 CTGAAAAAAACAAACATACACTTCATCAGCCGGCTGTTACTTTTAAACCA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38340___yw 1148 CTGAAAAAAACAAACATACACTTCATCAGCCGGCTGTTACTTTTAAACCA 1197
BSNT_05862___ 1201 TAA 1203
|||
BSU38340___yw 1198 TAA 1200
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