Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05854 and BSU38280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence dna-align/BSNT_05854___ywbL.1.22522.seq
# -bsequence dna-align/BSU38280___efeU.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05854___ywbL-BSU38280___efeU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05854___ywbL-BSU38280___efeU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05854___ywbL
# 2: BSU38280___efeU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1446
# Identity: 1404/1446 (97.1%)
# Similarity: 1404/1446 (97.1%)
# Gaps: 3/1446 ( 0.2%)
# Score: 6853.0
#
#
#=======================================
BSNT_05854___ 1 ATGGCTCGGGGGCTGGCGCTTATTCTATTCAGCTTGTTGATGGTTTTCGG 50
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU38280___ef 1 ATGGCTCGGGGGCTGGCACTTATTCTATTCAGCTTGTTGATGGTTTTCGG 50
BSNT_05854___ 51 TTCTGCGGCACATGCGGAAGATGATCCGATCGCCGCATTAATTCAATTAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 51 TTCTGCGGCACATGCGGAAGATGATCCGATCGCCGCATTAATTCAATTAA 100
BSNT_05854___ 101 ACAAGCAAATGATCAAATCCGTAACAGACGGGGATATGGATTCGGCACAA 150
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU38280___ef 101 ACAAGCAAATGATCAAATCCGTAAAAGACGGGGATATGGATTCGGCACAA 150
BSNT_05854___ 151 CAAACGTTTGAAACCTTCAAAGCGAAGTGGAAAAAAGAAGAACCTTCTAT 200
|||||||||||.||||||||.|||||||||||||||||||||||||||||
BSU38280___ef 151 CAAACGTTTGACACCTTCAAGGCGAAGTGGAAAAAAGAAGAACCTTCTAT 200
BSNT_05854___ 201 TAAAAAGGAAAACCTTTCTTCTCACAGCGAAATGGACGCGAATATCGCGA 250
|||.||.||||||||||||||||||||.||||||||||||||||||||||
BSU38280___ef 201 TAAGAAAGAAAACCTTTCTTCTCACAGTGAAATGGACGCGAATATCGCGA 250
BSNT_05854___ 251 TGATTTCTCTTTCTTATATCAATCAAGATACAGGCAAGCTCAAAACACAG 300
|||||||||||||||.||||||||||||..||.|.|||||||||||||||
BSU38280___ef 251 TGATTTCTCTTTCTTTTATCAATCAAGACGCACGTAAGCTCAAAACACAG 300
BSNT_05854___ 301 CTTGAAGAGCTTTCGTCTCATTTAGAAACCTATCAGCAGGCTGTCGTGCT 350
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU38280___ef 301 CTTGAAGAGCTTGCGTCTCATTTAGAAACCTATCAGCAGGCTGTCGTGCT 350
BSNT_05854___ 351 GAAAAAGACATCCTCAGGTCAATCAAGGGCGTCCTTAACAGCCTATATAC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 351 GAAAAAGACATCCTCAGGTCAATCAAGGGCGTCCTTAACAGCCTATATAC 400
BSNT_05854___ 401 ACAGCTTGAAAGACACAAAACAGTTAATAGAAAAAAAACAATTG---GAA 447
|.|||||||||||||||||||||||.|||||||||||||||||| |||
BSU38280___ef 401 AAAGCTTGAAAGACACAAAACAGTTCATAGAAAAAAAACAATTGGATGAA 450
BSNT_05854___ 448 GCGTCATCCGCAATCGACAATTTAGTTACATCCTGGCTCGCCGTTGAGGG 497
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU38280___ef 451 GCGTCATCCGCAATCGACAATTTAGTTACATCCTGGCTCGCTGTTGAGGG 500
BSNT_05854___ 498 AGACGTCGTTTCCCAATCGAAAGAAGCCTATACGACATCGGAGGAAAATC 547
|||.|||||.||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 501 AGATGTCGTGTCCCAATCGAAAGAAGCCTATACGACATCGGAGGAAAATC 550
BSNT_05854___ 548 TGGCGCTGATGAAGGCGGAAATCGGCAGCCATCCCGAAAAGGTATCAAAG 597
|||||||||||||||||||.||||||||||||||.|||||||||||||||
BSU38280___ef 551 TGGCGCTGATGAAGGCGGAGATCGGCAGCCATCCTGAAAAGGTATCAAAG 600
BSNT_05854___ 598 CAAATTGACGAAATGATTCAATTGCTCGAGCCGATCGCTTCAAGCAGCTA 647
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 601 CAAATTGACGAAATGATTCAATTGCTCGAGCCGATCGCTTCAAGCAGCTA 650
BSNT_05854___ 648 CAGCTGGTGGGATGCGGCGCTGATCCCGATTCGTGAAGGAATGGAGGCCC 697
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU38280___ef 651 CAGCTGGTGGGATGCGGCGCTGATCCCGGTTCGTGAAGGAATGGAGGCCC 700
BSNT_05854___ 698 TCCTTGTCATCGGAGCGCTATTAACCATGACAAAAAAAGCGCGGGTCACG 747
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38280___ef 701 TCCTTGTCATCGGAGCGCTATTAACCATGACAAAAAAAGCGCGGGTTACG 750
BSNT_05854___ 748 CGCTCCTCGGCATGGATCTGGGGCGGGGCGTCCGCTGGCATGGCTGTTTC 797
||.||||||.|||||||||||||||||||||||||.||||||||||||||
BSU38280___ef 751 CGTTCCTCGACATGGATCTGGGGCGGGGCGTCCGCCGGCATGGCTGTTTC 800
BSNT_05854___ 798 CTTAGCAGCCGGCATCGGTGTCACGGTTCTGTTCTCCTCCAGTGTATTCG 847
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 801 CTTAGCAGCCGGCATCGGTGTCACGGTTCTGTTCTCCTCCAGTGTATTCG 850
BSNT_05854___ 848 GAGAAAATAATTTCTTGCTTGGCGGCGTTACCGGTGTACTGTCCGCTATC 897
|||||||.||||||||||||||||||||||||||.||||||||||||.||
BSU38280___ef 851 GAGAAAACAATTTCTTGCTTGGCGGCGTTACCGGCGTACTGTCCGCTGTC 900
BSNT_05854___ 898 ATGCTTTTGTATGTCGGGGTGTGGCTGCACAGAAACGCCTCAATGGATAA 947
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 901 ATGCTTTTGTATGTCGGGGTGTGGCTGCACAGAAACGCCTCAATGGATAA 950
BSNT_05854___ 948 ATGGAGAGAAAAAATCAATATCCAGAAGTCACAGGCACTAAAAAAACGAA 997
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 951 ATGGAGAGAAAAAATCAATATCCAGAAGTCACAGGCACTAAAAAAACGAA 1000
BSNT_05854___ 998 GCCTGCTTTCCTTTGCGCTCATTGCATTTCTGGCCGTTGTAAGAGAAGGA 1047
||||||||||||||||||||||||||||||||||.||||||||||||||.
BSU38280___ef 1001 GCCTGCTTTCCTTTGCGCTCATTGCATTTCTGGCAGTTGTAAGAGAAGGT 1050
BSNT_05854___ 1048 CTCGAAACGGTCATCTTTTTCATCGGGCTTGTCGGGAAGCTCCCGCTCAC 1097
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 1051 CTCGAAACGGTCATCTTTTTCATCGGGCTTGTCGGGAAGCTCCCGCTCAC 1100
BSNT_05854___ 1098 TGAACTGATCGGCGGAACTGCCGCAGGGCTTATCGTTCTCGTCATCGTCG 1147
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 1101 TGAACTGATCGGCGGAACTGCCGCAGGGCTTATCGTTCTCGTCATCGTCG 1150
BSNT_05854___ 1148 GGGTTCTATTGATCAAGCTCGGACTGCGCATTCCATTAAAGCCGTTTTTT 1197
|.|||||..||||||||||||||.|||||||||||||.||||||||||||
BSU38280___ef 1151 GTGTTCTGATGATCAAGCTCGGAATGCGCATTCCATTGAAGCCGTTTTTT 1200
BSNT_05854___ 1198 CTTCTATCAATGGCGGTTGTCCTGTATATGTGCGTGAAATTTCTCGGAAC 1247
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 1201 CTTCTATCAATGGCGGTTGTCCTGTATATGTGCGTGAAATTTCTCGGAAC 1250
BSNT_05854___ 1248 TGGCGTTCACAGCCTTCAGCTGGCGGGCATTCTTCCGTCTGATGCAGAAA 1297
.|||||||||||||||||.|||||||||||||||||||||||||||||||
BSU38280___ef 1251 CGGCGTTCACAGCCTTCAACTGGCGGGCATTCTTCCGTCTGATGCAGAAA 1300
BSNT_05854___ 1298 GCTGGCTGCCGTCTGTATCGGTGCTGGGAATTTATCCGTCTGTGTACAGC 1347
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU38280___ef 1301 GCTGGCTGCCGTCTGTATCGGTGCTAGGAATTTATCCGTCTGTGTACAGC 1350
BSNT_05854___ 1348 ACGATTCCGCAAATGTTGATTTTACTCTTTTTACTGATTGCGCTTGTTTC 1397
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 1351 ACGATTCCGCAAATGTTGATTTTACTCTTTTTACTGATTGCGCTTGTTTC 1400
BSNT_05854___ 1398 AGAAACGGCAAAACATTTTACAAACGGAAAGGAACTGACAAAATGA 1443
||||.|||||||||||||||||||||||||||||||||||||||||
BSU38280___ef 1401 AGAAGCGGCAAAACATTTTACAAACGGAAAGGAACTGACAAAATGA 1446
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