Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05852 and BSU38260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence dna-align/BSNT_05852___ywbN.1.22522.seq
# -bsequence dna-align/BSU38260___efeN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05852___ywbN-BSU38260___efeN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05852___ywbN-BSU38260___efeN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05852___ywbN
# 2: BSU38260___efeN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1251
# Identity: 1217/1251 (97.3%)
# Similarity: 1217/1251 (97.3%)
# Gaps: 0/1251 ( 0.0%)
# Score: 5949.0
#
#
#=======================================
BSNT_05852___ 1 ATGAGCGATGAACAAAAAAAGCCAGAACAAATTCATAGACGGGACATTTT 50
||||||||||||||.||||||||||||||||||||.||||||||||||||
BSU38260___ef 1 ATGAGCGATGAACAGAAAAAGCCAGAACAAATTCACAGACGGGACATTTT 50
BSNT_05852___ 51 AAAATGGGGGGCAATGGCGGGGGCAGCCGTTGCGATCGGTGCCAGCGGAC 100
|||||||||.||.|||||||||||||||||||||||||||||||||||.|
BSU38260___ef 51 AAAATGGGGAGCGATGGCGGGGGCAGCCGTTGCGATCGGTGCCAGCGGTC 100
BSNT_05852___ 101 TCGGCGGTCTCGCTCCGCTTGTTCAGACTGCGGCTAAGCCATCGAAAAAG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef 101 TCGGCGGTCTCGCTCCGCTTGTTCAGACTGCGGCTAAGCCATCGAAAAAG 150
BSNT_05852___ 151 GATGAAAAAGAGGAGGAGCAGATTGTTCCGTTTTACGGAAAGCATCAGGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef 151 GATGAAAAAGAGGAGGAGCAGATTGTTCCGTTTTACGGAAAGCATCAGGC 200
BSNT_05852___ 201 CGGAATCACAACTGCCCATCAGACGTATGTCTATTTTGCTGCGCTGGATG 250
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38260___ef 201 CGGAATCACAACTGCCCATCAGACGTATGTCTATTTTGCTGCACTGGATG 250
BSNT_05852___ 251 TAACAGCAAAAGACAAAAGCGACATCATTACGTTATTTAGAAACTGGACA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef 251 TAACAGCAAAAGACAAAAGCGACATCATTACGTTATTTAGAAACTGGACA 300
BSNT_05852___ 301 AGTCTCACACAGATGCTGACATCTGGCAAGAAAATGTCATCGGAGCAGAG 350
||||||||||||||||||||.||||||||||||||||||.||||||||||
BSU38260___ef 301 AGTCTCACACAGATGCTGACGTCTGGCAAGAAAATGTCAGCGGAGCAGAG 350
BSNT_05852___ 351 AAATCAATATCTGCCCCCGCAGGATACAGGTGAGTCTGCTGATTTATCCC 400
||||||.||||||||.||||||||||||||||||||||||||||||||||
BSU38260___ef 351 AAATCAGTATCTGCCGCCGCAGGATACAGGTGAGTCTGCTGATTTATCCC 400
BSNT_05852___ 401 CTTCCAACTTAACGGTCACATTCGGATTTGGGCCTGGCTTTTTTGAAAAA 450
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU38260___ef 401 CTTCCAACTTAACGGTCACATTCGGATTCGGGCCTGGCTTTTTTGAAAAA 450
BSNT_05852___ 451 GACGGAAAGGACCGCTTCGGGCTGAAAAGCAAAAAACCGAAGCACCTAGC 500
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU38260___ef 451 GACGGAAAGGACCGCTTCGGACTGAAAAGCAAAAAACCGAAGCACCTAGC 500
BSNT_05852___ 501 CGCTCTTCCAGCGATGCCTAATGACAACCTGGATGAAAAGCAGGGAGGCG 550
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU38260___ef 501 CGCTCTTCCAGCGATGCCCAATGACAACCTGGATGAAAAGCAGGGAGGCG 550
BSNT_05852___ 551 GGGACATCTGCATTCAAGTATGTGCAGACGATGAGCAAGTGGCGTTTCAC 600
|||||||||||||||||||.|||||||||||.||||||||||||||||||
BSU38260___ef 551 GGGACATCTGCATTCAAGTGTGTGCAGACGACGAGCAAGTGGCGTTTCAC 600
BSNT_05852___ 601 GCGCTGCGTAACCTGCTAAATCAAGCGGTCGGCACTTGTGAGGTCCGTTT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef 601 GCGCTGCGTAACCTGCTAAATCAAGCGGTCGGCACTTGTGAGGTCCGTTT 650
BSNT_05852___ 651 TGTGAACAAAGGCTTTTTAAGCGGAGGAAAAAATGGCGAAACACCGCGCA 700
||||||||||||||||||||||||.|||||||||||.|||||||||||||
BSU38260___ef 651 TGTGAACAAAGGCTTTTTAAGCGGTGGAAAAAATGGTGAAACACCGCGCA 700
BSNT_05852___ 701 ACCTCTTCGGATTCAAAGATGGAACAGGCAACCAGAGCACGGAGGATGAC 750
||||||||||.||.|||||||||||||||||||||||||||.||||||||
BSU38260___ef 701 ACCTCTTCGGGTTTAAAGATGGAACAGGCAACCAGAGCACGAAGGATGAC 750
BSNT_05852___ 751 AGCTTGATGAACTCGATCGTGTGGGTTCAGTCCGGTGAGCCTGACTGGAT 800
|..|||||||||||||||||||||.|||||||.|||||||||||||||||
BSU38260___ef 751 ACGTTGATGAACTCGATCGTGTGGATTCAGTCTGGTGAGCCTGACTGGAT 800
BSNT_05852___ 801 GACGGGCGGCACCTATATGGCTTTCCGGAAAATCAAAATGTTCCTTGAGA 850
||||||||||||||||||||||||.||||||||||||||||||||||||.
BSU38260___ef 801 GACGGGCGGCACCTATATGGCTTTTCGGAAAATCAAAATGTTCCTTGAGG 850
BSNT_05852___ 851 TATGGGACCGCTCTTCCCTCAAGGATCAAGAGGATACCTTCGGCCGCAGA 900
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU38260___ef 851 TATGGGACCGCTCTTCCCTCAAGGACCAAGAGGATACCTTCGGCCGCAGA 900
BSNT_05852___ 901 AAAAGCTCAGGGGCGCCTTTCGGACAGAAAAAGGAAACAGATCCCGTGAA 950
||||||||.|||||||||||.||.||||||||||||||||||||||||||
BSU38260___ef 901 AAAAGCTCGGGGGCGCCTTTTGGGCAGAAAAAGGAAACAGATCCCGTGAA 950
BSNT_05852___ 951 GCTGAATCAAATTCCGTCTAATTCGCACGTCAGTCTAGCGAAATCTACGG 1000
||||||||||||||||||||||||.|||||||||||||||||||||||.|
BSU38260___ef 951 GCTGAATCAAATTCCGTCTAATTCACACGTCAGTCTAGCGAAATCTACTG 1000
BSNT_05852___ 1001 GAAAACAAATTTTGCGAAGAGCTTTCTCTTACACAGAAGGACTTGATCCG 1050
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef 1001 GGAAACAAATTTTGCGAAGAGCTTTCTCTTACACAGAAGGACTTGATCCG 1050
BSNT_05852___ 1051 AAAACCGGCTATATGGATGCAGGTCTCCTGTTTATCAGTTTTCAAAAAAA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef 1051 AAAACCGGCTATATGGATGCAGGTCTCCTGTTTATCAGTTTTCAAAAAAA 1100
BSNT_05852___ 1101 TCCCGACAATCAGTTTATCCCGATGCTGAAGGCTCTTTCAGCAAAGGATG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef 1101 TCCCGACAATCAGTTTATCCCGATGCTGAAGGCTCTTTCAGCAAAGGATG 1150
BSNT_05852___ 1151 CGTTAAACGAATATACACAAACAATCGGTTCTGCTTTATATGCATGCCCA 1200
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU38260___ef 1151 CGTTAAACGAATATACACAAACAATCGGTTCTGCTTTATACGCATGCCCA 1200
BSNT_05852___ 1201 GGCGGCTGCAAAAAAGGAGAATATATTGCCCAGCGTTTGCTGGAATCATA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef 1201 GGCGGCTGCAAAAAAGGAGAATATATTGCCCAGCGTTTGCTGGAATCATA 1250
BSNT_05852___ 1251 A 1251
|
BSU38260___ef 1251 A 1251
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